Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21272 | Canola | nucleus | 89.63 | 89.63 |
| Bra000774.1-P | Field mustard | nucleus | 89.63 | 89.63 |
| AT4G22540.5 | Thale cress | cytosol | 82.28 | 79.2 |
| CDX90832 | Canola | nucleus | 88.9 | 72.67 |
| Solyc08g078960.2.1 | Tomato | cytosol | 51.3 | 68.86 |
| Os10t0554100-01 | Rice | cytosol | 35.3 | 67.49 |
| KRH77382 | Soybean | cytosol | 72.91 | 65.71 |
| VIT_02s0154g00240.t01 | Wine grape | cytosol, nucleus | 68.44 | 65.61 |
| VIT_02s0154g00250.t01 | Wine grape | mitochondrion | 46.4 | 65.05 |
| KRH28046 | Soybean | cytosol | 71.47 | 64.75 |
| GSMUA_Achr5P20840_001 | Banana | cytosol | 47.69 | 64.52 |
| KRH04091 | Soybean | cytosol | 71.04 | 64.19 |
| PGSC0003DMT400012089 | Potato | cytosol | 67.15 | 64.1 |
| KRH57364 | Soybean | cytosol | 70.75 | 63.77 |
| GSMUA_Achr11P... | Banana | cytosol | 59.51 | 60.38 |
| GSMUA_Achr6P36780_001 | Banana | cytosol | 57.35 | 57.68 |
| AT2G31030.1 | Thale cress | cytosol | 40.2 | 57.06 |
| GSMUA_Achr11P... | Banana | cytosol | 58.07 | 56.52 |
| Os08t0154900-00 | Rice | cytosol | 58.36 | 55.63 |
| HORVU4Hr1G088060.4 | Barley | mitochondrion | 51.01 | 55.14 |
| TraesCS4B01G375900.1 | Wheat | cytosol | 56.48 | 54.44 |
| TraesCS7D01G297200.3 | Wheat | cytosol | 57.93 | 54.32 |
| TraesCS7B01G202100.1 | Wheat | cytosol | 57.93 | 54.25 |
| HORVU7Hr1G071680.28 | Barley | cytosol | 57.93 | 54.1 |
| HORVU1Hr1G053930.1 | Barley | cytosol | 57.06 | 53.66 |
| TraesCS5A01G537000.1 | Wheat | cytosol, nucleus, plasma membrane | 56.48 | 53.63 |
| TraesCS7A01G302000.3 | Wheat | cytosol | 57.93 | 53.6 |
| EES13369 | Sorghum | cytosol | 57.35 | 53.49 |
| Zm00001d029872_P002 | Maize | cytosol, extracellular, nucleus | 56.34 | 53.2 |
| TraesCS1A01G210800.1 | Wheat | cytosol | 56.48 | 53.04 |
| TraesCS1B01G224800.1 | Wheat | cytosol | 56.63 | 52.97 |
| TraesCS1D01G214100.1 | Wheat | cytosol | 56.48 | 52.83 |
| KXG40415 | Sorghum | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 55.19 | 52.54 |
| EER91955 | Sorghum | cytosol, extracellular, nucleus | 56.63 | 52.12 |
| AT2G31020.1 | Thale cress | plastid | 57.35 | 51.16 |
| TraesCS4D01G361400.2 | Wheat | cytosol, nucleus, plasma membrane | 53.89 | 50.75 |
| Zm00001d048544_P003 | Maize | cytosol | 54.47 | 50.6 |
| Zm00001d049556_P002 | Maize | cytosol | 52.59 | 49.59 |
| Zm00001d047105_P007 | Maize | cytosol, extracellular, nucleus | 53.75 | 49.34 |
| AT4G08180.4 | Thale cress | cytosol | 57.06 | 48.65 |
| AT1G13170.2 | Thale cress | cytosol | 53.75 | 44.56 |
| AT1G77730.1 | Thale cress | plastid | 12.25 | 32.08 |
| AT5G59420.1 | Thale cress | cytosol, plastid | 18.73 | 28.45 |
| AT5G02100.1 | Thale cress | cytosol, plastid | 18.01 | 27.59 |
| AT3G09300.1 | Thale cress | nucleus, plastid | 18.16 | 27.51 |
Protein Annotations
| Gene3D:2.40.160.120 | MapMan:35.1 | EntrezGene:826858 | UniProt:A0A1P8B378 | ProteinID:ANM66037.1 | ProteinID:ANM66038.1 |
| ProteinID:ANM66039.1 | ProteinID:ANM66042.1 | ArrayExpress:AT4G12460 | EnsemblPlantsGene:AT4G12460 | RefSeq:AT4G12460 | TAIR:AT4G12460 |
| RefSeq:AT4G12460-TAIR-G | EnsemblPlants:AT4G12460.7 | Unigene:At.33471 | ncoils:Coil | InterPro:IPR001849 | RefSeq:NP_001327963.1 |
| RefSeq:NP_001327964.1 | RefSeq:NP_001327965.1 | RefSeq:NP_001327968.1 | Symbol:ORP2B | InterPro:OSBP_sf | InterPro:Oxysterol-bd |
| PFAM:PF01237 | PFAM:PF15413 | InterPro:PH_domain | PFscan:PS50003 | PANTHER:PTHR10972 | PANTHER:PTHR10972:SF88 |
| SMART:SM00233 | SUPFAM:SSF144000 | SUPFAM:SSF50729 | UniParc:UPI00000A17BE | : | : |
Description
ORP2BOSBP(oxysterol binding protein)-related protein 2B [Source:TAIR;Acc:AT4G12460]
Coordinates
chr4:+:7391234..7396511
Molecular Weight (calculated)
79697.9 Da
IEP (calculated)
7.709
GRAVY (calculated)
-0.699
Length
694 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLTRSKSLP ATENGGSDRE TLQSGRSVAG ILYKWTNYGK GWRSRWFLLR DGILSYSKIR RPENVNLLSP SDDLRLIGDI STDRLLRMKS CSGRSRRKHH
101: KNIGIVHLKQ VSSYRESKSD HRKFYIFTAT KTLHLRTDSR SDRAAWLQAL ASTRGIVPLQ SINGDFSFVS PKDLSISTER LKKRLFEEGM NESLVKECEQ
201: IVDSEFCEVQ EQIKLLHEER KKLLDALRQL EMANLEAEAS GIHDDVYQLR NHKYSSLGRG KYSECSTSAS SDDKQEFEDI SEEDEASFHD TKESFGEPDV
301: GSVLTHFKRR TKLPDPAEKE RGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDQAY EYGKSGKSLL RALNVAAFAV SGYASTEGRH
401: CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQLEPVGILT LEFDDGEIFQ WSKVTTTIYN ILLGKLYCDH
501: HGIMKIRGNR QYSCMLKFKE QSILDRNPHQ VNGFVEDVTG KKAATVFGKW NDSLYYVAGD GINKASASLL WKATKAPPNV TRYNFTSFAM TLNELIPGLE
601: EKLPPTDSRL RPDQRHLENG EYEKANEEKQ RLERRQRMSR QIQESGWRPR WFEPQGESES YKYTGGYWEA RDVKSWDDCP NIFGEFTEEV ADCA
101: KNIGIVHLKQ VSSYRESKSD HRKFYIFTAT KTLHLRTDSR SDRAAWLQAL ASTRGIVPLQ SINGDFSFVS PKDLSISTER LKKRLFEEGM NESLVKECEQ
201: IVDSEFCEVQ EQIKLLHEER KKLLDALRQL EMANLEAEAS GIHDDVYQLR NHKYSSLGRG KYSECSTSAS SDDKQEFEDI SEEDEASFHD TKESFGEPDV
301: GSVLTHFKRR TKLPDPAEKE RGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDQAY EYGKSGKSLL RALNVAAFAV SGYASTEGRH
401: CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQLEPVGILT LEFDDGEIFQ WSKVTTTIYN ILLGKLYCDH
501: HGIMKIRGNR QYSCMLKFKE QSILDRNPHQ VNGFVEDVTG KKAATVFGKW NDSLYYVAGD GINKASASLL WKATKAPPNV TRYNFTSFAM TLNELIPGLE
601: EKLPPTDSRL RPDQRHLENG EYEKANEEKQ RLERRQRMSR QIQESGWRPR WFEPQGESES YKYTGGYWEA RDVKSWDDCP NIFGEFTEEV ADCA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.