Factsheet for TraesCS5A01G537000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

plasma membrane 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G375900.1	Wheat	cytosol	95.62	97.08
HORVU4Hr1G088060.4	Barley	mitochondrion	80.71	91.9
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	92.07	91.32
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	72.09	72.29
TraesCS1A01G210800.1	Wheat	cytosol	70.72	69.96
Zm00001d048544_P003	Maize	cytosol	70.59	69.08
GSMUA_Achr5P20840_001	Banana	cytosol	46.79	66.67
Solyc08g078960.2.1	Tomato	cytosol	45.42	64.22
GSMUA_Achr11P...	Banana	cytosol	58.69	62.72
GSMUA_Achr11P...	Banana	cytosol	61.01	62.55
VIT_02s0154g00250.t01	Wine grape	mitochondrion	40.77	60.2
PGSC0003DMT400012089	Potato	cytosol	58.0	58.32
TraesCS7A01G302000.3	Wheat	cytosol	58.41	56.93
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	56.22	56.77
AT4G12460.7	Thale cress	cytosol	53.63	56.48
AT4G22540.5	Thale cress	cytosol	55.68	56.45
CDY21272	Canola	nucleus	52.94	55.76
Bra000774.1-P	Field mustard	nucleus	52.94	55.76
CDX76366	Canola	cytosol	54.58	55.34
CDX79161	Canola	cytosol	54.99	55.3
Bra013624.1-P	Field mustard	cytosol	54.99	55.3
KRH04091	Soybean	cytosol	57.73	54.95
CDX82950	Canola	cytosol	54.58	54.88
KRH57364	Soybean	cytosol	57.73	54.81
KRH77382	Soybean	cytosol	57.73	54.81
KRH28046	Soybean	cytosol	56.63	54.05
Bra020844.1-P	Field mustard	plastid	53.08	53.67
CDY42177	Canola	cytosol	54.31	52.1
TraesCS5A01G117800.1	Wheat	cytosol	47.88	46.98
TraesCS4A01G271700.1	Wheat	plastid	50.62	46.08
CDX90832	Canola	nucleus	53.21	45.82
TraesCS4A01G096600.1	Wheat	cytosol	17.24	27.21

Protein Annotations

EnsemblPlants:TraesCS5A01G537000.1	EnsemblPlantsGene:TraesCS5A01G537000	Gene3D:2.40.160.120	InterPro:IPR001849	InterPro:OSBP_sf	InterPro:Oxysterol-bd
InterPro:PH_domain	PANTHER:PTHR10972	PANTHER:PTHR10972:SF104	PFAM:PF01237	PFAM:PF15413	PFscan:PS50003
SEG:seg	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	MapMan:35.1	:

Description

No Description!

Coordinates

chr5A:+:693626191..693632232

Molecular Weight (calculated)

82613.1 Da

IEP (calculated)

6.860

GRAVY (calculated)

-0.695

Length

731 amino acids

Sequence
(BLAST)

001: MRMRARDLHP LCCLPVDCPG GWCADRSPSS PPPAPAPAAV AGLLHKWTNI GKGWRPRWFA ILRGGLLAYS KIRPRAAGSP TPSAPAPEDG RPRLIGPAGY
101: AAAAPEDRPI GLVHLKISSF RESKSDDKRF YIITPTKTLQ LRTNSVKDRV AWIEALVSAR SESSPNGVLL YDQNDASFST DRLRNRMHAE GLGEEVIKDC
201: EQIVHSEFLQ YYTQMKQRCE EYLSFLGSLP QQLEVLNEQD TTHSIRPECS CSGHGKCCES SNTESSDDAG IQELDESSDE DDYNFCDTRQ SFSDSAASPD
301: MRMKHSNSSN DVQQYNHNFV ESRSGKGENE CLLLPPKRRT KLPEPVEKEK GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSHLLDHAYD
401: YGLKGNSVMR TLCVAAFAVS GYASSDGRPC KPFNPLLGET YEADFPENGI RFFSEKVSHH PMVMACHCEG RGWKFWGESN VKSKFWGQTI QLDPVGVLTL
501: EFDDGEIFKW SKVTTTINNL IIGRLYCHHH GTMKISGNRQ HSCKLTFKQQ SFLERNPRQV QGVVEDIGGT KVATLRGKWD ESLYCNVTND GVNSSAESTL
601: LWEKHEPPTN PTRYNLSSFA ITLNELTPNL KEKLPPTDSR LRPDQRHLEN GEYDKANSEK LRLETRQRMA RKMQDNGWKP RWFDRDTEDG AFHYTGGYWE
701: AREQRKWDGC RDIFGELPDK KTYPVPASVG I

Best Arabidopsis Sequence Match ( AT4G12460.1 )
(BLAST)

001: MPLTRSKSLP ATENGGSDRE TLQSGRSVAG ILYKWTNYGK GWRSRWFLLR DGILSYSKIR RPENVNLLSP SDDLRLIGDI STDRLLRMKS CSGRSRRKHH
101: KNIGIVHLKV SSYRESKSDH RKFYIFTATK TLHLRTDSRS DRAAWLQALA STRGIVPLQS INGDFSFVSP KDLSISTERL KKRLFEEGMN ESLVKECEQI
201: VDSEFCEVQE QIKLLHEERK KLLDALRQLE MANLEAEASG IHDDVYQLRN HKYSSLGRGK YSECSTSASS DDKQEFEDIS EEDEASFHDT KESFGEPDVG
301: SVLTHFKRRT KLPDPAEKER GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDQAYE YGKSGKSLLR ALNVAAFAVS GYASTEGRHC
401: KPFNPLLGET YEADFPEKGI RFFSEKVSHH PTVIACHCEG KGWKFWGDTN LRSKFWGRSI QLEPVGILTL EFDDGEIFQW SKVTTTIYNI LLGKLYCDHH
501: GIMKIRGNRQ YSCMLKFKEQ SILDRNPHQV NGFVEDVTGK KAATVFGKWN DSLYYVAGDG INKASASLLW KATKAPPNVT RYNFTSFAMT LNELIPGLEE
601: KLPPTDSRLR PDQRHLENGE YEKANEEKQR LERRQRMSRQ IQESGWRPRW FEPQGESESY KYTGGYWEAR DVKSWDDCPN IFGEFTEEVA DCA

Arabidopsis Description

ORP2BOSBP(oxysterol binding protein)-related protein 2B [Source:TAIR;Acc:AT4G12460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.