CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79161	Canola	cytosol	98.9	98.9
AT4G22540.5	Thale cress	cytosol	89.96	90.71
CDX76366	Canola	cytosol	89.68	90.43
CDY42177	Canola	cytosol	88.86	84.78
CDY21272	Canola	nucleus	77.44	81.12
Solyc08g078960.2.1	Tomato	cytosol	51.31	72.15
Os10t0554100-01	Rice	cytosol	35.35	70.8
PGSC0003DMT400012089	Potato	cytosol	68.5	68.5
VIT_02s0154g00250.t01	Wine grape	mitochondrion	46.08	67.68
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	67.13	67.4
KRH77382	Soybean	cytosol	71.25	67.27
KRH28046	Soybean	cytosol	70.43	66.84
KRH57364	Soybean	cytosol	70.7	66.75
KRH04091	Soybean	cytosol	70.43	66.67
CDX90832	Canola	nucleus	76.75	65.72
GSMUA_Achr5P20840_001	Banana	cytosol	46.22	65.5
GSMUA_Achr11P...	Banana	cytosol	59.7	63.45
CDX75168	Canola	endoplasmic reticulum	41.68	60.72
GSMUA_Achr6P36780_001	Banana	cytosol	56.67	59.71
GSMUA_Achr11P...	Banana	cytosol	58.05	59.19
CDY59861	Canola	endoplasmic reticulum	40.44	58.92
Os08t0154900-00	Rice	cytosol	57.5	57.42
TraesCS7B01G202100.1	Wheat	cytosol	58.32	57.22
TraesCS7D01G297200.3	Wheat	cytosol	58.05	57.03
HORVU7Hr1G071680.28	Barley	cytosol	58.18	56.93
TraesCS7A01G302000.3	Wheat	cytosol	58.18	56.4
HORVU4Hr1G088060.4	Barley	mitochondrion	49.38	55.92
TraesCS4B01G375900.1	Wheat	cytosol	55.3	55.83
HORVU1Hr1G053930.1	Barley	cytosol	56.12	55.28
EES13369	Sorghum	cytosol	56.26	54.97
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	55.57	54.97
TraesCS1A01G210800.1	Wheat	cytosol	55.71	54.8
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.75	54.6
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	54.88	54.58
TraesCS1D01G214100.1	Wheat	cytosol	55.71	54.58
TraesCS1B01G224800.1	Wheat	cytosol	55.57	54.45
EER91955	Sorghum	cytosol, extracellular, nucleus	56.12	54.11
Zm00001d048544_P003	Maize	cytosol	54.33	52.88
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	52.54	51.83
Zm00001d049556_P002	Maize	cytosol	52.13	51.49
CDX83144	Canola	nucleus, plastid	55.3	51.28
CDY34011	Canola	nucleus, plastid	55.3	51.28
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	53.23	51.19
CDY19393	Canola	cytosol	52.96	49.49
CDX98007	Canola	cytosol	52.68	49.42
CDY51776	Canola	golgi	10.87	42.47
CDX75169	Canola	plastid	31.36	39.86
CDY14648	Canola	plastid	12.1	34.11
CDY64064	Canola	plastid	12.1	34.11
CDY33036	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	17.88	28.45
CDY44693	Canola	cytosol, plastid	17.61	28.19
CDX80271	Canola	cytosol	17.74	28.17
CDY07917	Canola	cytosol	17.19	28.15
CDY41621	Canola	cytosol, plastid	17.47	28.04
CDX73970	Canola	cytosol	17.06	27.93
CDY10468	Canola	cytosol	17.19	27.59
CDY40331	Canola	cytosol, plastid	17.06	27.37
CDY22188	Canola	nucleus	6.46	26.7

Protein Annotations

EnsemblPlants:CDX82950	EnsemblPlantsGene:GSBRNA2T00138346001	Gene3D:2.40.160.120	InterPro:IPR001849	InterPro:OSBP_sf	InterPro:Oxysterol-bd
InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR10972	PANTHER:PTHR10972:SF88	PFAM:PF01237	PFAM:PF15413
PFscan:PS50003	ProteinID:CDX82950	ProteinID:CDX82950.1	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729
UniParc:UPI0004EB6114	MapMan:35.1	:	:	:	:

Description

BnaC01g14000D

Coordinates

chrLK031830:-:1571079..1575932

Molecular Weight (calculated)

82594.2 Da

IEP (calculated)

8.123

GRAVY (calculated)

-0.679

Length

727 amino acids

Sequence
(BLAST)

001: MRVKELHPLC CITLESPHAL DDNKPPPQPV TNLTRSRSLP ATSLTGGSNR RSLASAGSVA GILYKWTNFS KGWRSRYFLL RDGILSYSKI RRPENLNLLS
101: SSDDVRLIGN ISADRLSRMD SCSGRRKQEK SVGIVHLKVS SFRESKSDER KFYIFTATKT LHLRTDSISD RAAWLQALAS AKCIFPLRSL NGDFSFTSPK
201: DLSISTERLK KRLQEAGMNE NLVKDCEQIM LSEFSEMHGQ IKLLHDERTN LFDALRQLEE ANLEAGAPGI HSSLGRGKYS ECSTTASSDD KQEFEDVSEE
301: DEPSFHDTKE YFNEPNIGSG SNLPNNSGYA DIKRRTKLPD PAEKEKAVSL WSMIKDNVGK DLTRVCLPVY FNEPISSLQK CFEDLEYSYL LDRAYEHGKS
401: GNGLLRALNV AAFAVSGYAS TEGRHCKPFN PLLGETYEAD FPEKGIRFFS EKVSHHPTVI ANHCEGKGWK FWGDTNLRSK FWGRSIQVEP VGVLTLEFDD
501: GEVFQWSKVT STIYNIILGK LYCDHHGVMQ IRGNRQYSCT LKFKEQSILE RNPHQVNGFV EDVAGKKAAT VFGKWDDSLY YVAGDGVSKT KVSDPASNAS
601: LLWRRTKPPP NVTRYNLTSF AITLNELTPG LKEMLPPTDS RLRPDQRHLE NGEYEKANLE KQRLERRQRM SRQLQESGWR PRWFEKQGEN ETFKYTGGYW
701: EARGHRKWDD CPNIFGEFTE EQLADSA

Best Arabidopsis Sequence Match ( AT4G22540.1 )
(BLAST)

001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A

Arabidopsis Description

ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.