Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008330.1-P | Field mustard | plastid | 98.06 | 98.06 |
| CDY64064 | Canola | plastid | 98.06 | 98.06 |
| AT1G77730.1 | Thale cress | plastid | 87.21 | 84.91 |
| CDX75169 | Canola | plastid | 47.67 | 21.5 |
| CDX83144 | Canola | nucleus, plastid | 49.22 | 16.2 |
| CDY34011 | Canola | nucleus, plastid | 48.45 | 15.94 |
| CDY19393 | Canola | cytosol | 41.09 | 13.62 |
| CDX98007 | Canola | cytosol | 38.76 | 12.9 |
| CDX82950 | Canola | cytosol | 34.11 | 12.1 |
| CDX79161 | Canola | cytosol | 34.11 | 12.1 |
| CDY21272 | Canola | nucleus | 31.78 | 11.82 |
| CDX76366 | Canola | cytosol | 32.95 | 11.79 |
| CDY42177 | Canola | cytosol | 31.01 | 10.5 |
| CDX90832 | Canola | nucleus | 31.4 | 9.54 |
| CDX75168 | Canola | endoplasmic reticulum | 4.26 | 2.2 |
| CDY59861 | Canola | endoplasmic reticulum | 4.26 | 2.2 |
| CDY41621 | Canola | cytosol, plastid | 2.33 | 1.32 |
| CDY44693 | Canola | cytosol, plastid | 2.33 | 1.32 |
| CDY33036 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 2.33 | 1.31 |
| CDX80271 | Canola | cytosol | 2.33 | 1.31 |
| CDY40331 | Canola | cytosol, plastid | 1.94 | 1.1 |
| CDY10468 | Canola | cytosol | 1.55 | 0.88 |
| CDX73970 | Canola | cytosol | 1.16 | 0.68 |
| CDY07917 | Canola | cytosol | 1.16 | 0.68 |
| CDY22188 | Canola | nucleus | 0.39 | 0.57 |
| CDY51776 | Canola | golgi | 0.39 | 0.54 |
Protein Annotations
| EnsemblPlants:CDY14648 | EnsemblPlantsGene:GSBRNA2T00084425001 | InterPro:IPR001849 | InterPro:Oxysterol-bd | InterPro:PH_domain | PANTHER:PTHR10972 |
| PANTHER:PTHR10972:SF100 | PFAM:PF15413 | PFscan:PS50003 | ProteinID:CDY14648 | ProteinID:CDY14648.1 | SMART:SM00233 |
| SUPFAM:SSF50729 | UniParc:UPI0004EE061E | UniProt:A0A078FQQ2 | MapMan:35.1 | : | : |
Description
BnaC02g24650DBnaC02g24650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQQ2]
Coordinates
chrLK032045:-:815550..818496
Molecular Weight (calculated)
29244.0 Da
IEP (calculated)
10.121
GRAVY (calculated)
-0.593
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPLAAKSN PTTRSISLNT PHSARPNRHH DLRYSLSAGP RTNEDRPQSG NGVAGILYKW INYGQGWKRR WFVLQDGVLS YYRIHGPDKI SLSVEMDRRS
101: KLIGGESLRF ICRHSKRADV HSPGKPLGQI HLKVSSIGQG ISDSKRFTVF TGTKSLHLRA ASSEDRTAWI EALRAVKETF PRMSNEELMA TTTNVSISTD
201: KLRQRLMKEE VDETIIKDCE DIMKNNFIAL HNEVMTLKQY QCHLVDTLKN VNSVPELE
101: KLIGGESLRF ICRHSKRADV HSPGKPLGQI HLKVSSIGQG ISDSKRFTVF TGTKSLHLRA ASSEDRTAWI EALRAVKETF PRMSNEELMA TTTNVSISTD
201: KLRQRLMKEE VDETIIKDCE DIMKNNFIAL HNEVMTLKQY QCHLVDTLKN VNSVPELE
001: MSSPLAAKSN LTTTRSASLN IPHSTRTNHN HDLRYSLSAG PRTNEDRPAS GNGVAGILYK WVNYGQGWKR RWFVLQDGVL SYYRIHGPDK ISLSVEMDRR
101: SKLIGGESLR FICRHSKRGD VHSPGKPLGQ IHLKVSSIGQ SISDGKRFTV FTGTKSLHLR AATSEDRASW IEALKAVKET FPRMSNEELM ASTTNVSVST
201: DKLRQRLMEE EVDETIIKDC EDIMKNNFLA LHDEVMSLKR YQYHLIDSLK NVSNSPIRPS NQSFS
101: SKLIGGESLR FICRHSKRGD VHSPGKPLGQ IHLKVSSIGQ SISDGKRFTV FTGTKSLHLR AATSEDRASW IEALKAVKET FPRMSNEELM ASTTNVSVST
201: DKLRQRLMEE EVDETIIKDC EDIMKNNFLA LHDEVMSLKR YQYHLIDSLK NVSNSPIRPS NQSFS
Arabidopsis Description
Pleckstrin homology (PH) domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CA21]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.