CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G010630.1	Barley	cytosol	32.26	57.14
CDY22188	Canola	nucleus	18.28	19.32
CDX75168	Canola	endoplasmic reticulum	46.77	17.43
CDY19393	Canola	cytosol	70.97	16.97
CDX98007	Canola	cytosol	70.43	16.9
CDY59861	Canola	endoplasmic reticulum	45.16	16.83
AT1G13170.2	Thale cress	cytosol	69.89	15.53
Zm00001d030609_P002	Maize	cytosol	59.14	14.8
Os12t0285600-01	Rice	cytosol	59.68	14.68
GSMUA_Achr9P02070_001	Banana	cytosol	58.6	14.49
GSMUA_Achr6P06750_001	Banana	cytosol	58.6	14.4
Solyc05g013960.2.1	Tomato	cytosol	61.83	14.36
VIT_01s0137g00290.t01	Wine grape	cytosol	61.29	14.32
PGSC0003DMT400027973	Potato	cytosol	61.29	14.21
TraesCS5A01G117800.1	Wheat	cytosol	56.45	14.09
KXG23396	Sorghum	cytosol	55.91	14.09
TraesCS5D01G120100.1	Wheat	cytosol	56.45	14.08
TraesCS5B01G116700.1	Wheat	cytosol	55.91	13.92
KRG97509	Soybean	plastid	60.22	13.61
KRH31371	Soybean	plastid	60.22	13.59
CDX76366	Canola	cytosol	42.47	10.96
CDX82950	Canola	cytosol	42.47	10.87
CDY34011	Canola	nucleus, plastid	45.7	10.84
CDX83144	Canola	nucleus, plastid	45.7	10.84
CDY21272	Canola	nucleus	40.32	10.81
CDX79161	Canola	cytosol	41.94	10.73
CDY42177	Canola	cytosol	40.86	9.97
CDX73970	Canola	cytosol	22.58	9.46
CDY44693	Canola	cytosol, plastid	22.58	9.25
CDY07917	Canola	cytosol	22.04	9.23
CDY41621	Canola	cytosol, plastid	22.04	9.05
CDY33036	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	22.04	8.97
CDX80271	Canola	cytosol	22.04	8.95
CDX90832	Canola	nucleus	40.32	8.83
CDY10468	Canola	cytosol	19.89	8.17
CDY40331	Canola	cytosol, plastid	19.35	7.95
CDY64064	Canola	plastid	0.54	0.39
CDY14648	Canola	plastid	0.54	0.39
CDX75169	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDY51776	EnsemblPlantsGene:GSBRNA2T00004210001	GO:A0A078IP85	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:OSBP_sf	InterPro:Oxysterol-bd	PANTHER:PTHR10972	PANTHER:PTHR10972:SF67	PFAM:PF01237	ProteinID:CDY51776
ProteinID:CDY51776.1	SUPFAM:SSF144000	TMHMM:TMhelix	UniParc:UPI0004EE8B45	UniProt:A0A078IP85	MapMan:35.1

Description

BnaC05g49590DBnaC05g49590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IP85]

Coordinates

chrLK033025:-:64701..65589

Molecular Weight (calculated)

21756.5 Da

IEP (calculated)

10.279

GRAVY (calculated)

-0.534

Length

186 amino acids

Sequence
(BLAST)

001: MRIKGGGNYS CRLKFKEQSV KDRNPRQVVH VFVQDNRTGE KVAILIGKWD EAMYYVLGDP TTKPKGYDLM TAAITLGMMD KLPSTDSRLR PDQRHLENGE
101: YHAAKLRLAV LETGTNFTII KLEKGWKPRW FGKDEGDYRY LGGYWKQERR NIGTKITDIF KKQQQRNTVF SLFIIILCFR SFICFF

Best Arabidopsis Sequence Match ( AT1G13170.1 )
(BLAST)

001: MNPLCCIAPV SIDDRTNPVV AKSSNHHLGL EAIPVSKHAS KPSFSTQASW ISQDQLERLS SEVVDDVNLD GKDASSSSNK GCFFFGNCVG AGAGVAGIMY
101: KWVNYGKGWR ARWFELEDGV LSYYKIHGPD KIVMNPSREK GVRVIGEESV RYIRKASCGS SNRLGASAVA ASRPCKPFGE IHLKVSSIRA SKSDDKRLAI
201: FTGTKTLHLR CVSKENRAAW VEAFQVAKDL FPRVASGDIL PSEDAVVSTE KLREKLLQEG VGETVVKDCE AIMLSEVSVL QNRLKVLTHK HIILLDTLRQ
301: LETEKIELEA TVVDETKEHD SCCGQGRRFS DFYSVMSEVS ASDSEADNES QDGADVESDE DDVPYFDTND ILSAEAMRSA SYRSREAEGN GSIYDKDPFF
401: SDRLQIPARI PQYPYVRRRD NLPEPKEKEK PVGLWSIIKE NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLIDRALE WGKQGNELMR ILNIAAFAVS
501: GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PMIVACHCEG QGWNFWGDSN IKGKFWGRSI QLDPVGVLTL KFDDGEIYQW SKVTTSIYNI
601: ILGKLYCDHY GTMRIKGGSN YSCRLKFKEQ SVIDRNPRQV HGFVQDNRTG EKVAILIGKW DEAMYYVLGD PTTKPKGYDP MTEAVLLWER DKSPTKTRYN
701: LSPFAISLNE ITPGMIDKLP PTDSRLRPDQ RHLENGEYES ANAEKLRLEQ LQRQARRLQE KGWKPRWFEK DEEGNYRYLG GYWEAREKKD WDRITDIFKK
801: QQQRNSLSSS SSSTFL

Arabidopsis Description

ORP1DOSBP(Oxysterol binding protein)-related protein 1D [Source:UniProtKB/TrEMBL;Acc:F4HP28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.