CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
cytosol 2
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97509	Soybean	plastid	96.48	96.6
HORVU0Hr1G010630.1	Barley	cytosol	10.56	82.86
VIT_01s0137g00290.t01	Wine grape	cytosol	78.64	81.41
Solyc05g013960.2.1	Tomato	cytosol	75.0	77.15
PGSC0003DMT400027973	Potato	cytosol	74.88	76.93
CDY19393	Canola	cytosol	71.36	75.58
CDX98007	Canola	cytosol	70.02	74.45
GSMUA_Achr6P06750_001	Banana	cytosol	67.96	73.98
GSMUA_Achr9P02070_001	Banana	cytosol	67.48	73.94
Bra019814.1-P	Field mustard	cytosol	72.82	73.26
AT1G13170.2	Thale cress	cytosol	72.33	71.21
Os12t0285600-01	Rice	cytosol	64.44	70.24
TraesCS5D01G120100.1	Wheat	cytosol	62.62	69.17
TraesCS5A01G117800.1	Wheat	cytosol	62.5	69.13
KXG23396	Sorghum	cytosol	61.77	68.97
TraesCS5B01G116700.1	Wheat	cytosol	62.5	68.94
Zm00001d030609_P002	Maize	cytosol	62.01	68.78
CDY51776	Canola	golgi	13.59	60.22
KRH53184	Soybean	plastid	57.16	59.7
KRH64734	Soybean	plastid	56.31	59.26
KRH16599	Soybean	plastid	55.95	58.8
KRH18807	Soybean	plastid	55.83	58.45
KRH04091	Soybean	cytosol	49.76	53.39
KRH77382	Soybean	cytosol	49.76	53.25
KRH28046	Soybean	cytosol	48.91	52.61
KRH57364	Soybean	cytosol	49.03	52.47
KRH63940	Soybean	nucleus, plastid	50.24	52.08
KRH53998	Soybean	plastid	50.36	52.01
KRG93817	Soybean	cytosol	4.37	40.0
KRG99957	Soybean	cytosol, plastid	16.63	29.65
KRH10248	Soybean	endoplasmic reticulum	15.66	28.29
KRH49107	Soybean	endoplasmic reticulum	15.78	28.02
KRH29789	Soybean	endoplasmic reticulum	15.29	28.0
KRH24783	Soybean	plastid	15.17	27.78

Protein Annotations

EntrezGene:100817856	Gene3D:2.40.160.120	MapMan:35.1	EMBL:ACUP02007142	ncoils:Coil	EnsemblPlantsGene:GLYMA_11G244600
UniProt:I1LNE8	InterPro:IPR001849	EnsemblPlants:KRH31371	ProteinID:KRH31371	ProteinID:KRH31371.1	InterPro:OSBP_sf
InterPro:Oxysterol-bd	PFAM:PF01237	PFAM:PF15413	InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR10972
PANTHER:PTHR10972:SF67	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI000233C264	SEG:seg

Description

hypothetical protein

Coordinates

chr11:-:33831956..33838505

Molecular Weight (calculated)

93033.2 Da

IEP (calculated)

5.827

GRAVY (calculated)

-0.618

Length

824 amino acids

Sequence
(BLAST)

001: MNPLCCIAPV SIDRDRPNHV LAKSPAQCQL GLDASIRTVN HASKSSSSTQ DSSVAVDSVK ATSAVADLPE EEEPRDSKAF SGGNGGGVAG SVAGILYKWV
101: NYGKGWRSRW FVLEDGVLSY YKIHGPDKIL MSPAKDRSVR VIGEESSKFV KKANWNLNLN RASSGGGVGG GNSSNNGKQC KPFGEIHLKV SSVRSSKSDD
201: KRLSIFTGTK TLHLRCVSRE DRAMWIEALQ SAKDLFPRAL TSSDLATSED IVVSTEKLRS RLSQESISET IINDCESIML SEVSYLQSKL KFLQQKHVML
301: LDTLKQLETE KIELETTVVD ETKERESYCG QGNRRFSDFY SVMSEGSATD SVADNESQDG ADVETDDEDR TYFDTNEFLY SDALRSASYR SREGMGNASI
401: FDRDYICYDG VHGFDKEIKD VSYPYVKRRD NLPEPKEKEK PVGLWSIIKD NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLVDRALE WGKQGNDLMR
501: ILNIAAFAVS SYASTEGRQC KPFNPLLGET YEADYPDKGL KFFSEKVSHH PMIVACHCEG RGWKFWADSN LKGKFWGRSI QLDPVGVLTL QFEDGETFQW
601: SKVTTSIYNI ILGKIYCDHY GTMHIKGSGN YSCKLKFKEQ SIIDRNPHQV HGFVQDNRTG EKVAMLIGKW DEAMYYVLGD PTTKPKGYDP MTEAALLWER
701: DNHLPKTRYN LSPFAISLNE ILPGLSEKLP PTDSRLRPDQ RHLENGEYEL ANAEKLRLEQ LQRQARKMQE RGWQPRWFKK EEDGCYRYIG GYWETREKNN
801: WDGIPDIFGQ SCDLPSCSEE TASY

Best Arabidopsis Sequence Match ( AT1G13170.1 )
(BLAST)

001: MNPLCCIAPV SIDDRTNPVV AKSSNHHLGL EAIPVSKHAS KPSFSTQASW ISQDQLERLS SEVVDDVNLD GKDASSSSNK GCFFFGNCVG AGAGVAGIMY
101: KWVNYGKGWR ARWFELEDGV LSYYKIHGPD KIVMNPSREK GVRVIGEESV RYIRKASCGS SNRLGASAVA ASRPCKPFGE IHLKVSSIRA SKSDDKRLAI
201: FTGTKTLHLR CVSKENRAAW VEAFQVAKDL FPRVASGDIL PSEDAVVSTE KLREKLLQEG VGETVVKDCE AIMLSEVSVL QNRLKVLTHK HIILLDTLRQ
301: LETEKIELEA TVVDETKEHD SCCGQGRRFS DFYSVMSEVS ASDSEADNES QDGADVESDE DDVPYFDTND ILSAEAMRSA SYRSREAEGN GSIYDKDPFF
401: SDRLQIPARI PQYPYVRRRD NLPEPKEKEK PVGLWSIIKE NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLIDRALE WGKQGNELMR ILNIAAFAVS
501: GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PMIVACHCEG QGWNFWGDSN IKGKFWGRSI QLDPVGVLTL KFDDGEIYQW SKVTTSIYNI
601: ILGKLYCDHY GTMRIKGGSN YSCRLKFKEQ SVIDRNPRQV HGFVQDNRTG EKVAILIGKW DEAMYYVLGD PTTKPKGYDP MTEAVLLWER DKSPTKTRYN
701: LSPFAISLNE ITPGMIDKLP PTDSRLRPDQ RHLENGEYES ANAEKLRLEQ LQRQARRLQE KGWKPRWFEK DEEGNYRYLG GYWEAREKKD WDRITDIFKK
801: QQQRNSLSSS SSSTFL

Arabidopsis Description

ORP1DOSBP(Oxysterol binding protein)-related protein 1D [Source:UniProtKB/TrEMBL;Acc:F4HP28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.