CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, golgi, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	golgi, nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16599	Soybean	plastid	94.03	94.39
KRH53184	Soybean	plastid	84.12	83.9
KRH64734	Soybean	plastid	83.23	83.65
VIT_18s0001g03790.t01	Wine grape	cytosol	75.73	77.3
CDX83144	Canola	nucleus, plastid	73.95	74.23
Bra000639.1-P	Field mustard	nucleus, plastid	73.82	74.2
PGSC0003DMT400074661	Potato	plastid	74.21	73.83
Solyc11g013190.1.1	Tomato	nucleus, plastid	75.86	73.61
CDY34011	Canola	nucleus, plastid	73.19	73.47
CDX75168	Canola	endoplasmic reticulum	46.51	73.35
AT4G08180.4	Thale cress	cytosol	74.71	72.24
CDY59861	Canola	endoplasmic reticulum	45.62	71.94
Bra039764.1-P	Field mustard	endoplasmic reticulum	45.49	71.74
AT2G31020.1	Thale cress	plastid	70.52	71.34
AT2G31030.1	Thale cress	cytosol	41.93	67.48
CDX75169	Canola	plastid	48.16	66.26
KRH63940	Soybean	nucleus, plastid	60.74	60.13
KRH53998	Soybean	plastid	60.74	59.9
KRH57364	Soybean	cytosol	55.27	56.49
KRH04091	Soybean	cytosol	55.02	56.38
KRH31371	Soybean	plastid	58.45	55.83
KRG97509	Soybean	plastid	58.2	55.65
KRH28046	Soybean	cytosol	52.86	54.31
KRH77382	Soybean	cytosol	53.11	54.29
KRG93817	Soybean	cytosol	4.7	41.11
KRG99957	Soybean	cytosol, plastid	17.66	30.09
KRH49107	Soybean	endoplasmic reticulum	17.41	29.53
KRH10248	Soybean	endoplasmic reticulum	17.03	29.39
KRH29789	Soybean	endoplasmic reticulum	16.77	29.33
KRH24783	Soybean	plastid	16.65	29.11

Protein Annotations

Gene3D:2.40.160.120	MapMan:35.1	EMBL:ACUP02008133	ncoils:Coil	EnsemblPlantsGene:GLYMA_13G083300	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001849	UniProt:K7LX32	EnsemblPlants:KRH18807	ProteinID:KRH18807
ProteinID:KRH18807.1	InterPro:OSBP_sf	InterPro:Oxysterol-bd	PFAM:PF01237	PFAM:PF15413	InterPro:PH_domain
PFscan:PS50003	PANTHER:PTHR10972	PANTHER:PTHR10972:SF100	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729
UniParc:UPI000233BC5F	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:19306842..19314311

Molecular Weight (calculated)

89358.8 Da

IEP (calculated)

6.680

GRAVY (calculated)

-0.713

Length

787 amino acids

Sequence
(BLAST)

001: MHPFCCVSAV SDNSSPAPFA APAIAMPPLP GRSDSAPRHA QLHLCLSNGG VSGRASLPPA PAAVDVRIND LVGNGISGIL HKWVNYGKGW RPRWFVLQDG
101: VLSYYKIHGP DKIVVNSETE KGSKVIGDES ARMISRNRNS NHAVNHRRKP LGEIHLKIST IRESRSDDKR FSVFTGTKRL HLRADTREDR VAWVEALQAV
201: KDMFPRISNS ELMAPVDNVA VSTEKLRHRL MEEGVSEAAI QDTEQIMRNE YAALQNQLQL LKQKQVALID TLRQLETEKV DLENTVVDES QRQLNDQEAS
301: SRLRQEKSSE ASASESEDDN ERNDAAEEET DEDDSAFFDT RDFLSSSNSF KSNGSDIRAS SFSSDDGLYT VESEEDVDPS IKSVGGNYPS VKRRRKLPDP
401: VEKEKGVSLW SMIKDNIGKD LTKVCLPVYF NEPLSSLQKC CEEMEYSYLI DRAYEWGRRG NSLMRILNVA AFAISAYAST EGRICKPFNP LLGETYEADF
501: PDKGIRFFSE KVSHHPMIVA CHCEGTGWKF WGDSNLKSKF WGRSIQLDPV GILTLEFDDG EVFQWRKVTT SIYNLILGKL YCDHYGTMRI QGNQDYSCNL
601: KFKEQSIIDR NPHQVHGIVQ DKNGKILSTL LGKWDDSMYY INGDYSGKGK GYESMSDAHL LWKRSKPPKF PTRYNFTRFA ITLNELTPGL KEKLPPTDSR
701: LRPDQRHLEN GEYDMANSEK LRLEQRQRQA RKMQESGWEP RWFGRDKESG TYRYLGGYWE ARKQGNWNSC PDIFGHIPSD HVSDEGQ

Best Arabidopsis Sequence Match ( AT4G08180.1 )
(BLAST)

001: MHPFCCVTTV SDHSPSMPPL PEPQPPLPNY AADFGSARSE PIITRSASQS YNHSGQFNNN LIHSLSFNHH QSDVTDRLGQ RVLALPAAVR EPPVDVKIND
101: IVGNGIAGIL YKWVNYGRGW RPRWFVLQDG VLSYYKIHGP DKIFVSPETE KGSKVIGDES ARMISRHNRR GGSSSSCQLR RKPFGEVHLK VSSVRESRSD
201: DKRFSIFTGT KRLHLRAETR EDRTTWVEAL QAVKDMFPRM SNSELMAPTN NLAMSTEKIR LRLIEEGVSE LAIQDCEQIM KSEFSALQSQ LVLLKQKQWL
301: LIDTLRQLET EKVDLENTVV DESQRQADNG CSGELRHEKF SEGTATESDD DNERGDAAEE EFDEEENTFF DTRDFLSSSS FKSSGSGFRT SSFSSDEDGF
401: ESEDDIDPSI KSIGCNYPRV KRRKNLPDPV EKEKSVSLWS MIKDNIGKDL TKVCLPVYFN EPLSSLQKCF EDLEYSYLLD RAFEYGKRGN SLMRILNVAA
501: FAVSGYASTE GRICKPFNPL LGETYEADYP DKGLRFFSEK VSHHPMVVAC HCDGTGWKFW GDSNLRSKFW GRSIQLDPVG VLTLQFDDGE ILQWSKVTTS
601: IYNLILGKLY CDHYGTMRIE GSAEYSCKLK FKEQSIIDRN PHQVHGIVQN KSGKTVATMF GKWDESIHFV TGDCSGKGKL SEDMSGAQLL WKRSKPPGNA
701: TKYNLTRFAI TLNELTPGLK ERLPPTDSRL RPDQRYLENG EFEMANTEKL RLEQRQRQAR KMQERGWKPR WFMKEKGSES YRYKGGYWEA REDGSWVDCP
801: DIFGHIDSDQ QMIE

Arabidopsis Description

ORP1COxysterol-binding protein-related protein 1C [Source:UniProtKB/Swiss-Prot;Acc:Q8L751]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.