CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 6
cytosol 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, golgi, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	golgi, nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64734	Soybean	plastid	96.2	96.93
KRH16599	Soybean	plastid	83.9	84.44
KRH18807	Soybean	plastid	83.9	84.12
VIT_18s0001g03790.t01	Wine grape	cytosol	77.95	79.77
CDX75168	Canola	endoplasmic reticulum	48.04	75.95
CDX83144	Canola	nucleus, plastid	74.27	74.74
Bra000639.1-P	Field mustard	nucleus, plastid	74.14	74.71
CDY34011	Canola	nucleus, plastid	73.76	74.23
CDY59861	Canola	endoplasmic reticulum	46.89	74.15
Bra039764.1-P	Field mustard	endoplasmic reticulum	46.77	73.95
PGSC0003DMT400074661	Potato	plastid	74.02	73.83
Solyc11g013190.1.1	Tomato	nucleus, plastid	75.67	73.61
AT2G31020.1	Thale cress	plastid	72.5	73.52
AT4G08180.4	Thale cress	cytosol	75.16	72.85
AT2G31030.1	Thale cress	cytosol	43.35	69.94
CDX75169	Canola	plastid	48.42	66.78
KRH63940	Soybean	nucleus, plastid	62.99	62.52
KRH53998	Soybean	plastid	63.12	62.41
KRH31371	Soybean	plastid	59.7	57.16
KRG97509	Soybean	plastid	59.06	56.62
KRH57364	Soybean	cytosol	53.87	55.19
KRH04091	Soybean	cytosol	53.61	55.08
KRH28046	Soybean	cytosol	53.11	54.7
KRH77382	Soybean	cytosol	52.85	54.16
KRG93817	Soybean	cytosol	4.82	42.22
KRG99957	Soybean	cytosol, plastid	17.87	30.52
KRH29789	Soybean	endoplasmic reticulum	17.24	30.22
KRH10248	Soybean	endoplasmic reticulum	17.36	30.04
KRH24783	Soybean	plastid	17.11	30.0
KRH49107	Soybean	endoplasmic reticulum	17.49	29.74

Protein Annotations

EntrezGene:100137077	Gene3D:2.40.160.120	MapMan:35.1	UniProt:A9ZM29	EMBL:AB244622	EMBL:ACUP02003452
ncoils:Coil	EnsemblPlantsGene:GLYMA_06G109500	InterPro:IPR001849	EnsemblPlants:KRH53184	ProteinID:KRH53184	ProteinID:KRH53184.1
InterPro:OSBP_sf	InterPro:Oxysterol-bd	PFAM:PF01237	PFAM:PF15413	InterPro:PH_domain	PFscan:PS50003
PANTHER:PTHR10972	PANTHER:PTHR10972:SF100	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI000162ECC8
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:8847551..8852822

Molecular Weight (calculated)

90270.9 Da

IEP (calculated)

6.667

GRAVY (calculated)

-0.711

Length

789 amino acids

Sequence
(BLAST)

001: MHPFCCVSAI SDQASPVKPS FADFAMPPLP AAAAATTVRS DSAPRHSHKH SHSHSGSQRE QPVVDVKIND LVGNGISGIL YKWVNYGKGW RPRWFVLQDG
101: VLSYYKIHGP DKIVVNPETE KGSMVIGEES MRRITRNRNS YPSQHIRKPF GEIHLKVSTI RESKSDEKRF SVFTGTKRLH LRAETREDRV AWMEALQAVK
201: DMFPRMSNSE LMAPVDNVTV STEKLRVRLM EEGVSEAAIQ DSEQIMRTEF AALQSQLVLL KQKHSALIDT LRQLETEKVD LEDTVVDESQ RQWNGEEASS
301: RLAQEKFSEG TASESEDDNE RNDAAEEETD DDDNAFFDTR DILSSSSFKS NGSDYRVSSF SSDDEGFYAF ESEDDIDPSI RYVGTNYPHV KRRKKLPDPV
401: EKEKGVSLWS MIKDNIGKDL TKVCLPVYFN EPLSSLQKCF EEMEYSYLLD QAYEWGKRGN SLMRILYVAA FAISGYASTE GRVCKPFNPL LGETYEAHYP
501: DKGLRFFSEK VSHHPMIVAC HCEGTGWKFW GDSNLKSKFW GRSIQLDPVG TLTLEFDDGE VFQWSKVTTS IYNLILGKLY CDHYGTMRIQ GNQEYSCKLK
601: FKEQSIIDRN PHQVHGIIQD SNGKTVSTLF GKWDESMHYV NGDYTGKGKG HESLSDARLL WKRSRAPKFP TRYNFTRFAI TLNELTPGLK EKLPPTDSRL
701: RPDQRYLENG EYDMANAEKL RLEQRQRQAR KMQESGWKPR WFAKDKASGS YRYLGGYWEA RQRGNWDSCP DIFGQIPSVH ISDEGQITF

Best Arabidopsis Sequence Match ( AT4G08180.1 )
(BLAST)

001: MHPFCCVTTV SDHSPSMPPL PEPQPPLPNY AADFGSARSE PIITRSASQS YNHSGQFNNN LIHSLSFNHH QSDVTDRLGQ RVLALPAAVR EPPVDVKIND
101: IVGNGIAGIL YKWVNYGRGW RPRWFVLQDG VLSYYKIHGP DKIFVSPETE KGSKVIGDES ARMISRHNRR GGSSSSCQLR RKPFGEVHLK VSSVRESRSD
201: DKRFSIFTGT KRLHLRAETR EDRTTWVEAL QAVKDMFPRM SNSELMAPTN NLAMSTEKIR LRLIEEGVSE LAIQDCEQIM KSEFSALQSQ LVLLKQKQWL
301: LIDTLRQLET EKVDLENTVV DESQRQADNG CSGELRHEKF SEGTATESDD DNERGDAAEE EFDEEENTFF DTRDFLSSSS FKSSGSGFRT SSFSSDEDGF
401: ESEDDIDPSI KSIGCNYPRV KRRKNLPDPV EKEKSVSLWS MIKDNIGKDL TKVCLPVYFN EPLSSLQKCF EDLEYSYLLD RAFEYGKRGN SLMRILNVAA
501: FAVSGYASTE GRICKPFNPL LGETYEADYP DKGLRFFSEK VSHHPMVVAC HCDGTGWKFW GDSNLRSKFW GRSIQLDPVG VLTLQFDDGE ILQWSKVTTS
601: IYNLILGKLY CDHYGTMRIE GSAEYSCKLK FKEQSIIDRN PHQVHGIVQN KSGKTVATMF GKWDESIHFV TGDCSGKGKL SEDMSGAQLL WKRSKPPGNA
701: TKYNLTRFAI TLNELTPGLK ERLPPTDSRL RPDQRYLENG EFEMANTEKL RLEQRQRQAR KMQERGWKPR WFMKEKGSES YRYKGGYWEA REDGSWVDCP
801: DIFGHIDSDQ QMIE

Arabidopsis Description

ORP1COxysterol-binding protein-related protein 1C [Source:UniProtKB/Swiss-Prot;Acc:Q8L751]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.