CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus, plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29789	Soybean	endoplasmic reticulum	98.0	98.0
KRH10248	Soybean	endoplasmic reticulum	91.33	90.13
VIT_06s0004g04930.t01	Wine grape	cytosol	87.78	86.62
CDX80271	Canola	cytosol	86.0	84.5
Bra002568.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	85.33	84.03
CDY33036	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	85.33	84.03
KRG93817	Soybean	cytosol	16.67	83.33
AT5G59420.1	Thale cress	cytosol, plastid	82.89	81.62
GSMUA_Achr9P03900_001	Banana	cytosol	80.44	79.21
KRH49107	Soybean	endoplasmic reticulum	81.56	79.09
KRG99957	Soybean	cytosol, plastid	80.89	78.79
GSMUA_Achr1P17320_001	Banana	cytosol	79.78	77.87
Zm00001d028606_P002	Maize	cytosol	76.67	74.84
Zm00001d047812_P001	Maize	extracellular	76.67	74.03
Os03t0274000-01	Rice	plasma membrane	75.11	73.0
TraesCS4A01G096600.1	Wheat	cytosol	74.22	72.14
TraesCS4B01G207800.1	Wheat	cytosol	73.78	71.71
TraesCS4D01G208700.1	Wheat	golgi	73.78	71.71
HORVU4Hr1G059840.1	Barley	cytosol	73.11	70.91
OQU92826	Sorghum	cytosol	76.44	69.78
Zm00001d037837_P002	Maize	endoplasmic reticulum, extracellular	40.67	59.42
Zm00001d006081_P001	Maize	cytosol	20.89	55.62
Zm00001d034225_P002	Maize	endoplasmic reticulum, extracellular	43.33	54.78
Zm00001d012754_P001	Maize	cytosol	35.78	51.11
Zm00001d052202_P001	Maize	cytosol	42.0	46.9
Zm00001d040358_P001	Maize	cytosol	43.11	38.04
KRH64734	Soybean	plastid	30.0	17.24
KRH53184	Soybean	plastid	30.0	17.11
KRH16599	Soybean	plastid	29.33	16.84
KRH18807	Soybean	plastid	29.11	16.65
KRH77382	Soybean	cytosol	28.22	16.49
KRH28046	Soybean	cytosol	28.0	16.45
KRH04091	Soybean	cytosol	27.33	16.02
KRH57364	Soybean	cytosol	27.11	15.84
KRH63940	Soybean	nucleus, plastid	27.78	15.72
KRH53998	Soybean	plastid	27.56	15.54
KRG97509	Soybean	plastid	27.78	15.19
KRH31371	Soybean	plastid	27.78	15.17

Protein Annotations

EMBL:ACUP02007186	EnsemblPlants:KRH24783	EnsemblPlantsGene:GLYMA_12G062400	EntrezGene:100810228	Gene3D:1.20.120.1290	Gene3D:2.40.160.120
InterPro:OSBP_sf	InterPro:Oxysterol-bd	InterPro:Oxysterol-bd_CS	PANTHER:PTHR10972	PANTHER:PTHR10972:SF136	PFAM:PF01237
ProteinID:KRH24783	ProteinID:KRH24783.1	ScanProsite:PS01013	SUPFAM:SSF144000	UniParc:UPI000233D2E7	UniProt:I1LQP7
MapMan:5.8.1.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:4558773..4563881

Molecular Weight (calculated)

51299.0 Da

IEP (calculated)

4.831

GRAVY (calculated)

-0.642

Length

450 amino acids

Sequence
(BLAST)

001: MGSPSKKNES KGFFAAMSSM FTSAVNRSVN GLSVEVINPE GGKEDAEEEA QRGRWKQEER DGYWKMMQKY IGSDVTSMVT LPVIIFEPMT MIQKIAELME
101: YSYLLDQADE SEDPYMRLVY ATSWAISVYF AYQRTWKPFN PILGETYEMV NHGGITFLAE QVSHHPPMSA AHAENEHFTY DVTSKLKTKF LGNSVDVYPV
201: GRTRVTLKRD GVVLDLVPPP TKVNNLIFGR TWIDSPGEMI MTNLTTGDKA VLYFQPCGWF GAGRYEVDGY IYNSSEEPKI LMTGKWNESM SYQPCDSEGE
301: PLPNTELKEV WHVADVPQND KFQYTHFAHK INSFDTAPRK LLASDSRLRP DRYALEMGDL SKSGTEKSSL EERQRAEKRS REEKGHSFTP RWFDLTEEVT
401: STPWGDLEIY QYNGKYSEHR AAADNSGSID DVDAKSIEFN PWQYGNLATE

Best Arabidopsis Sequence Match ( AT5G59420.1 )
(BLAST)

001: MGSPKKNENK GFFAAMTSGF SMFGTAVSRS VNGVQGNEGV EVINPEGGKE DAEEEAQKGR WKDEERDSYW KMMQKYIGSD ITSMVTLPVV IFEPMTMLQK
101: MAEIMEYSHL LDQADECEDP YLRLVYASSW AISVYYAFQR TWKPFNPILG ETYEMVNHGG ISFISEQVSH HPPMSAGHAE NEHFIYDITS KLKTKLLGNS
201: VDVYPVGRTR VTLKKDGVVL DLVPPLTKIH NLIFGRTWVD SPGEMVMTNL TTGDKVVLYF QPCGWFGSGR YEVDGYVYSA AEEPKIMMTG KWNEKMSYQP
301: CDAEGEPLPG TELKEVWHLA DVPKNDNFQY THFAHKINSF DTAPAKLLAS DSRIRPDRYS LEQGDLSKAG SEKHSLEERQ RAEKRTRETK GQKFTPRWFD
401: LTDEITPTPW GDIEVYQYNG KYNEHRDTAE SSSSASNETD LKSIEFNPWQ YGNISTE

Arabidopsis Description

ORP3COxysterol-binding protein-related protein 3C [Source:UniProtKB/Swiss-Prot;Acc:Q93Y40]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.