Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d034225_P002 | Maize | endoplasmic reticulum, extracellular | 88.31 | 76.4 |
| KRG93817 | Soybean | cytosol | 20.45 | 70.0 |
| Zm00001d040358_P001 | Maize | cytosol | 81.49 | 49.22 |
| Zm00001d052202_P001 | Maize | cytosol | 63.64 | 48.64 |
| Zm00001d028606_P002 | Maize | cytosol | 66.23 | 44.25 |
| Zm00001d047812_P001 | Maize | extracellular | 66.88 | 44.21 |
| TraesCS4B01G207800.1 | Wheat | cytosol | 62.66 | 41.68 |
| TraesCS4D01G208700.1 | Wheat | golgi | 62.66 | 41.68 |
| Os03t0274000-01 | Rice | plasma membrane | 62.66 | 41.68 |
| TraesCS4A01G096600.1 | Wheat | cytosol | 62.34 | 41.47 |
| HORVU4Hr1G059840.1 | Barley | cytosol | 62.34 | 41.38 |
| GSMUA_Achr9P03900_001 | Banana | cytosol | 61.04 | 41.14 |
| KRH10248 | Soybean | endoplasmic reticulum | 60.71 | 41.01 |
| KRH24783 | Soybean | plastid | 59.42 | 40.67 |
| KRH29789 | Soybean | endoplasmic reticulum | 59.09 | 40.44 |
| GSMUA_Achr1P17320_001 | Banana | cytosol | 59.74 | 39.91 |
| Bra002568.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 58.77 | 39.61 |
| CDY33036 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 58.77 | 39.61 |
| CDX80271 | Canola | cytosol | 58.77 | 39.52 |
| VIT_06s0004g04930.t01 | Wine grape | cytosol | 58.44 | 39.47 |
| VIT_08s0007g00480.t01 | Wine grape | cytosol | 57.14 | 39.46 |
| AT5G59420.1 | Thale cress | cytosol, plastid | 57.79 | 38.95 |
| KRH49107 | Soybean | endoplasmic reticulum | 57.47 | 38.15 |
| KRG99957 | Soybean | cytosol, plastid | 57.14 | 38.1 |
| Solyc10g084800.1.1 | Tomato | extracellular, plastid | 56.17 | 37.77 |
| PGSC0003DMT400028593 | Potato | cytosol, plastid | 56.17 | 34.39 |
| Zm00001d047105_P007 | Maize | cytosol, extracellular, nucleus | 25.65 | 10.45 |
| Zm00001d029872_P002 | Maize | cytosol, extracellular, nucleus | 24.68 | 10.34 |
| Zm00001d048544_P003 | Maize | cytosol | 24.35 | 10.04 |
| Zm00001d030609_P002 | Maize | cytosol | 24.03 | 9.96 |
| Zm00001d012754_P001 | Maize | cytosol | 10.06 | 9.84 |
| Zm00001d013470_P007 | Maize | plastid | 24.35 | 9.18 |
| Zm00001d033669_P003 | Maize | plastid | 24.35 | 9.15 |
| Zm00001d049556_P002 | Maize | cytosol | 19.16 | 8.02 |
| Zm00001d006081_P001 | Maize | cytosol | 4.22 | 7.69 |
Protein Annotations
| EnsemblPlants:Zm00001d037837_P002 | EnsemblPlants:Zm00001d037837_T002 | EnsemblPlantsGene:Zm00001d037837 | Gene3D:2.40.160.120 | InterPro:DUF789 | InterPro:OSBP_sf |
| InterPro:Oxysterol-bd | PANTHER:PTHR10972 | PANTHER:PTHR10972:SF136 | PFAM:PF01237 | PFAM:PF05623 | ProteinID:AQK84944.1 |
| SEG:seg | SUPFAM:SSF144000 | UniParc:UPI000843B899 | UniProt:A0A1D6M0Z5 | MapMan:5.8.1.1 | : |
Description
Oxysterol-binding protein-related protein 3B
Coordinates
chr6:-:139283148..139290687
Molecular Weight (calculated)
35001.5 Da
IEP (calculated)
4.662
GRAVY (calculated)
-0.369
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MMHKYIGSDV TSLVTLPVII FEPMTMLQKM AELMEYCELL DKADECEDPY MRMVYASTWA VSVYFAYQRT WKPFNLILGE TYEMVNHQGI TFLAEQVSHH
101: PPMGVAHCEN EHFTYDITSK VKTKFLGNSL EFYPVGRTRV TLKKSGVVLD LVPPLTKVNN LIFGRTWVDS PGEMVMTNLT IGDKVVLYFQ PCGWFDCRYP
201: NEGSDGDNAP ETSSDVSNES DNDNGRSIGR TTQCLAQNIC TDQERLSSDD CDSSNQEPPP VFQYMEHDAP YGRQPLANMV SHIPDTNRTY ATRSRCLLFN
301: IPFTVNNT
101: PPMGVAHCEN EHFTYDITSK VKTKFLGNSL EFYPVGRTRV TLKKSGVVLD LVPPLTKVNN LIFGRTWVDS PGEMVMTNLT IGDKVVLYFQ PCGWFDCRYP
201: NEGSDGDNAP ETSSDVSNES DNDNGRSIGR TTQCLAQNIC TDQERLSSDD CDSSNQEPPP VFQYMEHDAP YGRQPLANMV SHIPDTNRTY ATRSRCLLFN
301: IPFTVNNT
001: MAPNDPKKAV GGGGSGFFAS LASSISNLGS AMTKSVNGLV PYEGLEVINP EGSTDDAEEE ASRGRWKQED RDGYWKMMQK YIGSDVTSMV TLPVIIFEPM
101: TMLQKMAELM EYSHLLDMAD KTEDPYLRMV YASSWAISVY YAFQRTWKPF NPILGETYEM ANYNGVNFIS EQVSHHPPMS AGHAENEHFT YDCTSKLKTK
201: FLGNSIDVYP VGRTRVTLKR DGVVLDLVPP LTKVHNLIFG RTWVDSPGEM IMTNQTTGDK VVLYFQPCGW FGSGRYEVDG YVYNASEEPK ILMTGKWNES
301: MSYQPCDGEG EPLPGTELKE VWKLADVPKD DKYQYTHFAH KINSFDTAPK KLLPSDSRLR PDRYALEMGD MSKSGYEKSS MEERQRAEKR TREEKGQAFT
401: PKWFDVTEEV TATPWGDLEV YQFNGKYSEH RAAADNSEDN TDPKSIQFNP WQFQDLST
101: TMLQKMAELM EYSHLLDMAD KTEDPYLRMV YASSWAISVY YAFQRTWKPF NPILGETYEM ANYNGVNFIS EQVSHHPPMS AGHAENEHFT YDCTSKLKTK
201: FLGNSIDVYP VGRTRVTLKR DGVVLDLVPP LTKVHNLIFG RTWVDSPGEM IMTNQTTGDK VVLYFQPCGW FGSGRYEVDG YVYNASEEPK ILMTGKWNES
301: MSYQPCDGEG EPLPGTELKE VWKLADVPKD DKYQYTHFAH KINSFDTAPK KLLPSDSRLR PDRYALEMGD MSKSGYEKSS MEERQRAEKR TREEKGQAFT
401: PKWFDVTEEV TATPWGDLEV YQFNGKYSEH RAAADNSEDN TDPKSIQFNP WQFQDLST
Arabidopsis Description
ORP3BORP3B [Source:UniProtKB/TrEMBL;Acc:A0A178VKM3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.