Factsheet for Zm00001d033669_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91126	Sorghum	plastid	94.27	96.38
HORVU6Hr1G024620.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	8.78	93.51
Zm00001d013470_P007	Maize	plastid	91.95	92.29
HORVU2Hr1G031380.1	Barley	cytosol	36.83	88.82
TraesCS4A01G271700.1	Wheat	plastid	86.95	88.79
TraesCS4B01G042300.2	Wheat	plastid	87.44	87.98
TraesCS4D01G039500.1	Wheat	plastid	87.56	87.78
HORVU3Hr1G049220.1	Barley	cytosol	18.66	85.96
CDX75168	Canola	endoplasmic reticulum	45.61	74.95
CDY59861	Canola	endoplasmic reticulum	44.76	73.55
Bra039764.1-P	Field mustard	endoplasmic reticulum	44.63	73.35
GSMUA_Achr10P...	Banana	plastid	71.46	72.08
CDX83144	Canola	nucleus, plastid	67.93	71.05
Bra000639.1-P	Field mustard	nucleus, plastid	67.8	71.01
CDY34011	Canola	nucleus, plastid	67.56	70.66
AT2G31030.1	Thale cress	cytosol	41.22	69.12
AT4G08180.4	Thale cress	cytosol	67.68	68.18
VIT_07s0031g02980.t01	Wine grape	plastid	63.66	68.06
AT2G31020.1	Thale cress	plastid	63.66	67.1
GSMUA_Achr2P07260_001	Banana	plastid	57.32	66.67
KRH53998	Soybean	plastid	60.61	62.28
KRH63940	Soybean	nucleus, plastid	60.24	62.14
PGSC0003DMT400029169	Potato	nucleus	57.2	60.59
Solyc07g006100.2.1	Tomato	nucleus	57.68	60.56
CDX75169	Canola	plastid	42.2	60.49
PGSC0003DMT400020224	Potato	cytosol	47.68	59.88
Solyc12g010510.1.1	Tomato	cytosol, mitochondrion, plastid	47.56	59.45
Zm00001d030609_P002	Maize	cytosol	53.17	58.68
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	48.17	53.74
Zm00001d048544_P003	Maize	cytosol	45.49	49.93
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	45.61	49.47
Zm00001d049556_P002	Maize	cytosol	42.2	47.01
GSMUA_Achr3P21140_001	Banana	nucleus	73.54	42.65
Zm00001d028606_P002	Maize	cytosol	16.1	28.63
Zm00001d047812_P001	Maize	extracellular	16.1	28.33
Zm00001d034225_P002	Maize	endoplasmic reticulum, extracellular	10.61	24.44
Zm00001d037837_P002	Maize	endoplasmic reticulum, extracellular	9.15	24.35
Zm00001d012754_P001	Maize	cytosol	8.05	20.95
Zm00001d006081_P001	Maize	cytosol	4.27	20.71
Zm00001d052202_P001	Maize	cytosol	10.0	20.35
Zm00001d040358_P001	Maize	cytosol	10.61	17.06

Protein Annotations

EnsemblPlants:Zm00001d033669_P003	EnsemblPlants:Zm00001d033669_T003	EnsemblPlantsGene:Zm00001d033669	EntrezGene:103643871	Gene3D:2.40.160.120	InterPro:IPR001849
InterPro:OSBP_sf	InterPro:Oxysterol-bd	InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR10972	PANTHER:PTHR10972:SF100
PFAM:PF01237	PFAM:PF15413	PFscan:PS50003	ProteinID:ONM08392.1	SEG:seg	SMART:SM00233
SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI000844EE8A	UniProt:A0A1D6L1H8	MapMan:35.1	:

Description

Oxysterol-binding protein-related protein 1C

Coordinates

chr1:+:270220262..270238013

Molecular Weight (calculated)

92068.3 Da

IEP (calculated)

7.136

GRAVY (calculated)

-0.672

Length

820 amino acids

Sequence
(BLAST)

001: MHPFCCAPLV PVSPVASAAA ASSAVAGAPA VMPPPQPPPP PPPPPRSNPA SGGERRARAA GVSGGGGGGS SPPEGVKLNE IVGGGISGIL YKWVNYGRGW
101: RPRWFALHDG VLSYYKIHGP DRIILSRETE RGAKVIGDDS LRRLNRPSTS SSSHSNGHHH PRNPIGEIHL KVSTVRESRS DDRRFSIFSG TKTLHLRAET
201: REDRAAWLEA LRATKDMFPR MSSSEMVGPG DTAAAVAVST ERLRQRLQQE GVSEAAIADS EMIVRAEFEA LHKQLVLSKQ KHALLLETLR QLETEKVDLE
301: NTLVDESQRQ SKEYGSASKP RHEKYSEGSA SESDDYNEPQ DPAEETDDDE NLYFDTRDFL SSSSFKSSGS DFQRSEAGSD DEDDYPMDGI DPSMKSIGIS
401: YPYVRRRKKL PDPVEKEKGV SLWSMIKDNI GKDLTKVCLP VYFNEPLSSL QKCFEDLEYS YLIDRASEWG KRGNSLMRIL SVAAFAVSGY ASTDGRSCKP
501: FNPLLGETYE ADYPDKGLRF FSEKVSHHPM VVACHCEGTG WRFWADSNLK SKFWGRSIQL DPVGELTLEF DDGEVFQWSK VTTSIYNLIL GKLYCDHYGT
601: MRIQGNREYS CKLKFKEQSI IDRNPHQVQG VVQDRNGRTV ATLFGKWDES MHYVMGDCFG KGKGTEQLSE AHLLWKRSKP PKFPTRYNLT QFAITLNELT
701: PGLKEKLPPT DSRLRPDQRC LENGEYERAN AEKLRLEQRQ RQCSFLSSCI MLWSSNMIMA ITPQARKMQE SGWKPRWFAK DKATDTYRYV GGYWESREKS
801: SWEGCPDIFG QVPNDLMVTD

Best Arabidopsis Sequence Match ( AT4G08180.1 )
(BLAST)

001: MHPFCCVTTV SDHSPSMPPL PEPQPPLPNY AADFGSARSE PIITRSASQS YNHSGQFNNN LIHSLSFNHH QSDVTDRLGQ RVLALPAAVR EPPVDVKIND
101: IVGNGIAGIL YKWVNYGRGW RPRWFVLQDG VLSYYKIHGP DKIFVSPETE KGSKVIGDES ARMISRHNRR GGSSSSCQLR RKPFGEVHLK VSSVRESRSD
201: DKRFSIFTGT KRLHLRAETR EDRTTWVEAL QAVKDMFPRM SNSELMAPTN NLAMSTEKIR LRLIEEGVSE LAIQDCEQIM KSEFSALQSQ LVLLKQKQWL
301: LIDTLRQLET EKVDLENTVV DESQRQADNG CSGELRHEKF SEGTATESDD DNERGDAAEE EFDEEENTFF DTRDFLSSSS FKSSGSGFRT SSFSSDEDGF
401: ESEDDIDPSI KSIGCNYPRV KRRKNLPDPV EKEKSVSLWS MIKDNIGKDL TKVCLPVYFN EPLSSLQKCF EDLEYSYLLD RAFEYGKRGN SLMRILNVAA
501: FAVSGYASTE GRICKPFNPL LGETYEADYP DKGLRFFSEK VSHHPMVVAC HCDGTGWKFW GDSNLRSKFW GRSIQLDPVG VLTLQFDDGE ILQWSKVTTS
601: IYNLILGKLY CDHYGTMRIE GSAEYSCKLK FKEQSIIDRN PHQVHGIVQN KSGKTVATMF GKWDESIHFV TGDCSGKGKL SEDMSGAQLL WKRSKPPGNA
701: TKYNLTRFAI TLNELTPGLK ERLPPTDSRL RPDQRYLENG EFEMANTEKL RLEQRQRQAR KMQERGWKPR WFMKEKGSES YRYKGGYWEA REDGSWVDCP
801: DIFGHIDSDQ QMIE

Arabidopsis Description

ORP1COxysterol-binding protein-related protein 1C [Source:UniProtKB/Swiss-Prot;Acc:Q8L751]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.