Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g006100.2.1 | Tomato | nucleus | 95.35 | 94.49 |
| HORVU6Hr1G024620.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 7.88 | 79.22 |
| HORVU2Hr1G031380.1 | Barley | cytosol | 30.88 | 70.29 |
| HORVU3Hr1G049220.1 | Barley | cytosol | 15.12 | 65.73 |
| PGSC0003DMT400020224 | Potato | cytosol | 53.23 | 63.09 |
| VIT_07s0031g02980.t01 | Wine grape | plastid | 60.08 | 60.63 |
| PGSC0003DMT400074661 | Potato | plastid | 60.85 | 59.54 |
| OQU91126 | Sorghum | plastid | 60.72 | 58.6 |
| TraesCS4A01G271700.1 | Wheat | plastid | 59.95 | 57.78 |
| GSMUA_Achr2P07260_001 | Banana | plastid | 52.58 | 57.73 |
| Zm00001d033669_P003 | Maize | plastid | 60.59 | 57.2 |
| TraesCS4D01G039500.1 | Wheat | plastid | 60.08 | 56.85 |
| TraesCS4B01G042300.2 | Wheat | plastid | 59.82 | 56.81 |
| GSMUA_Achr10P... | Banana | plastid | 59.3 | 56.46 |
| Zm00001d013470_P007 | Maize | plastid | 59.3 | 56.18 |
| KRH63940 | Soybean | nucleus, plastid | 57.49 | 55.97 |
| KRH53998 | Soybean | plastid | 57.49 | 55.76 |
| PGSC0003DMT400012089 | Potato | cytosol | 49.48 | 52.68 |
| PGSC0003DMT400027973 | Potato | cytosol | 51.94 | 50.12 |
| GSMUA_Achr3P21140_001 | Banana | nucleus | 60.98 | 33.38 |
| PGSC0003DMT400028593 | Potato | cytosol, plastid | 17.31 | 26.64 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400029169 | EnsemblPlantsGene:PGSC0003DMG400011216 | Gene3D:2.40.160.120 | InterPro:IPR001849 | InterPro:OSBP_sf | InterPro:Oxysterol-bd |
| InterPro:PH_domain | ncoils:Coil | PANTHER:PTHR10972 | PANTHER:PTHR10972:SF138 | PFAM:PF01237 | PFAM:PF15413 |
| PFscan:PS50003 | PGSC:PGSC0003DMG400011216 | SEG:seg | SMART:SM00233 | SUPFAM:SSF144000 | SUPFAM:SSF50729 |
| UniParc:UPI0002954338 | UniProt:M1ASC2 | MapMan:35.1 | : | : | : |
Description
Oxysterol-binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400011216]
Coordinates
chr7:-:1458728..1469046
Molecular Weight (calculated)
88489.6 Da
IEP (calculated)
6.977
GRAVY (calculated)
-0.768
Length
774 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSICCDTDV ADRNTATALP ATNNIPLSKF LDMHPPRSPP HSKSRATANN NAEADYSGDE FHSARMNDVA GNDISGILYK WVNYGKGWRP RWFVLRDGVL
101: SYYKINGRHK IVTNSETEKG SMIIGEKSFR RINTSSSTSS KSHRRKPCGE IHLKVSSIES RSDDRRFSIS TGAKRLHLRA ETKEDRRIWL EALTAAVKLF
201: PKCDPVLEVQ MNENVSVSTE KLRQRLLEEG VSEVVIWDSE QIMRNEFVAL HSNLQQVKRK QMLLLDKLGQ LETEKVDLEN TLIDEGHRQA RDRQTYSEAS
301: LDKFRVFLGG SASGSDNEED DSDDEVDADS LFYDAKDVLS SSSTRSTDSD DERSSFDSAT VEFHPAEDGL GSGTRFATSD YPFVKRRKKL PEPHEKEKGV
401: GLWSMIKDNI GKDLTKVCLP VFFNEPLSSL QRCFEEFEYS YLLDQAYEWG KTGNSIMRIL SVAAFAVSGY ASTDGRMYKP FNPLLGETYE ADYPDKGLHF
501: ISEKVSHHPM ILACHCQGRG WKFWGETNLK SKFWGQSIQL DPVGALTVEF DDGEVFQWGK VTTSIYNIII GKLYCDHYGT MYIRGNRDYS CKLKFKEQSI
601: VERNPHQVHG VIHDKSGKRV ATINGKWDES LHYSMGDNPS DDVGEDSDSK SHLIWKRTKP SDFQTKYNLT HFAITLNELS PDLKKKLPPT DSRLRPDQRF
701: LENGEYEMAD SEKLRLEQRQ REASKMQERG WQPRWFAKQK GSDTYKYKGG YWEARQTGKW NSCPHIFGEI SQHT
101: SYYKINGRHK IVTNSETEKG SMIIGEKSFR RINTSSSTSS KSHRRKPCGE IHLKVSSIES RSDDRRFSIS TGAKRLHLRA ETKEDRRIWL EALTAAVKLF
201: PKCDPVLEVQ MNENVSVSTE KLRQRLLEEG VSEVVIWDSE QIMRNEFVAL HSNLQQVKRK QMLLLDKLGQ LETEKVDLEN TLIDEGHRQA RDRQTYSEAS
301: LDKFRVFLGG SASGSDNEED DSDDEVDADS LFYDAKDVLS SSSTRSTDSD DERSSFDSAT VEFHPAEDGL GSGTRFATSD YPFVKRRKKL PEPHEKEKGV
401: GLWSMIKDNI GKDLTKVCLP VFFNEPLSSL QRCFEEFEYS YLLDQAYEWG KTGNSIMRIL SVAAFAVSGY ASTDGRMYKP FNPLLGETYE ADYPDKGLHF
501: ISEKVSHHPM ILACHCQGRG WKFWGETNLK SKFWGQSIQL DPVGALTVEF DDGEVFQWGK VTTSIYNIII GKLYCDHYGT MYIRGNRDYS CKLKFKEQSI
601: VERNPHQVHG VIHDKSGKRV ATINGKWDES LHYSMGDNPS DDVGEDSDSK SHLIWKRTKP SDFQTKYNLT HFAITLNELS PDLKKKLPPT DSRLRPDQRF
701: LENGEYEMAD SEKLRLEQRQ REASKMQERG WQPRWFAKQK GSDTYKYKGG YWEARQTGKW NSCPHIFGEI SQHT
001: MHPFCCVTTV SDHSPSMPPL PEPQPPLPNY AADFGSARSE PIITRSASQS YNHSGQFNNN LIHSLSFNHH QSDVTDRLGQ RVLALPAAVR EPPVDVKIND
101: IVGNGIAGIL YKWVNYGRGW RPRWFVLQDG VLSYYKIHGP DKIFVSPETE KGSKVIGDES ARMISRHNRR GGSSSSCQLR RKPFGEVHLK VSSVRESRSD
201: DKRFSIFTGT KRLHLRAETR EDRTTWVEAL QAVKDMFPRM SNSELMAPTN NLAMSTEKIR LRLIEEGVSE LAIQDCEQIM KSEFSALQSQ LVLLKQKQWL
301: LIDTLRQLET EKVDLENTVV DESQRQADNG CSGELRHEKF SGTATESDDD NERGDAAEEE FDEEENTFFD TRDFLSSSSF KSSGSGFRTS SFSSDEDGFE
401: SEDDIDPSIK SIGCNYPRVK RRKNLPDPVE KEKSVSLWSM IKDNIGKDLT KVCLPVYFNE PLSSLQKCFE DLEYSYLLDR AFEYGKRGNS LMRILNVAAF
501: AVSGYASTEG RICKPFNPLL GETYEADYPD KGLRFFSEKV SHHPMVVACH CDGTGWKFWG DSNLRSKFWG RSIQLDPVGV LTLQFDDGEI LQWSKVTTSI
601: YNLILGKLYC DHYGTMRIEG SAEYSCKLKF KEQSIIDRNP HQVHGIVQNK SGKTVATMFG KWDESIHFVT GDCSGKGKLS EDMSGAQLLW KRSKPPGNAT
701: KYNLTRFAIT LNELTPGLKE RLPPTDSRLR PDQRYLENGE FEMANTEKLR LEQRQRQARK MQERGWKPRW FMKEKGSESY RYKGGYWEAR EDGSWVDCPD
801: IFGHIDSDQQ MIE
101: IVGNGIAGIL YKWVNYGRGW RPRWFVLQDG VLSYYKIHGP DKIFVSPETE KGSKVIGDES ARMISRHNRR GGSSSSCQLR RKPFGEVHLK VSSVRESRSD
201: DKRFSIFTGT KRLHLRAETR EDRTTWVEAL QAVKDMFPRM SNSELMAPTN NLAMSTEKIR LRLIEEGVSE LAIQDCEQIM KSEFSALQSQ LVLLKQKQWL
301: LIDTLRQLET EKVDLENTVV DESQRQADNG CSGELRHEKF SGTATESDDD NERGDAAEEE FDEEENTFFD TRDFLSSSSF KSSGSGFRTS SFSSDEDGFE
401: SEDDIDPSIK SIGCNYPRVK RRKNLPDPVE KEKSVSLWSM IKDNIGKDLT KVCLPVYFNE PLSSLQKCFE DLEYSYLLDR AFEYGKRGNS LMRILNVAAF
501: AVSGYASTEG RICKPFNPLL GETYEADYPD KGLRFFSEKV SHHPMVVACH CDGTGWKFWG DSNLRSKFWG RSIQLDPVGV LTLQFDDGEI LQWSKVTTSI
601: YNLILGKLYC DHYGTMRIEG SAEYSCKLKF KEQSIIDRNP HQVHGIVQNK SGKTVATMFG KWDESIHFVT GDCSGKGKLS EDMSGAQLLW KRSKPPGNAT
701: KYNLTRFAIT LNELTPGLKE RLPPTDSRLR PDQRYLENGE FEMANTEKLR LEQRQRQARK MQERGWKPRW FMKEKGSESY RYKGGYWEAR EDGSWVDCPD
801: IFGHIDSDQQ MIE
Arabidopsis Description
ORP1COxysterol-binding protein-related protein 1C [Source:UniProtKB/Swiss-Prot;Acc:Q8L751]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.