Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400029169 | Potato | nucleus | 94.49 | 95.35 |
| HORVU6Hr1G024620.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 7.94 | 80.52 |
| HORVU2Hr1G031380.1 | Barley | cytosol | 30.47 | 70.0 |
| HORVU3Hr1G049220.1 | Barley | cytosol | 14.85 | 65.17 |
| Solyc12g010510.1.1 | Tomato | cytosol, mitochondrion, plastid | 52.75 | 62.8 |
| VIT_07s0031g02980.t01 | Wine grape | plastid | 59.67 | 60.76 |
| Solyc11g013190.1.1 | Tomato | nucleus, plastid | 61.46 | 59.19 |
| OQU91126 | Sorghum | plastid | 60.56 | 58.98 |
| Solyc08g078960.2.1 | Tomato | cytosol | 38.54 | 58.22 |
| TraesCS4A01G271700.1 | Wheat | plastid | 59.67 | 58.03 |
| Zm00001d033669_P003 | Maize | plastid | 60.56 | 57.68 |
| GSMUA_Achr2P07260_001 | Banana | plastid | 51.98 | 57.59 |
| TraesCS4D01G039500.1 | Wheat | plastid | 59.8 | 57.09 |
| TraesCS4B01G042300.2 | Wheat | plastid | 59.54 | 57.06 |
| GSMUA_Achr10P... | Banana | plastid | 58.9 | 56.58 |
| Zm00001d013470_P007 | Maize | plastid | 59.15 | 56.55 |
| KRH63940 | Soybean | nucleus, plastid | 57.23 | 56.23 |
| KRH53998 | Soybean | plastid | 56.98 | 55.76 |
| Solyc05g013960.2.1 | Tomato | cytosol | 51.34 | 50.06 |
| GSMUA_Achr3P21140_001 | Banana | nucleus | 60.95 | 33.66 |
| Solyc10g084800.1.1 | Tomato | extracellular, plastid | 16.65 | 28.38 |
Protein Annotations
| EnsemblPlants:Solyc07g006100.2.1 | EnsemblPlantsGene:Solyc07g006100.2 | Gene3D:2.40.160.120 | InterPro:IPR001849 | InterPro:OSBP_sf | InterPro:Oxysterol-bd |
| InterPro:PH_domain | ncoils:Coil | PANTHER:PTHR10972 | PANTHER:PTHR10972:SF138 | PFAM:PF01237 | PFAM:PF15413 |
| PFscan:PS50003 | SEG:seg | SMART:SM00233 | SUPFAM:SSF144000 | SUPFAM:SSF50729 | UniParc:UPI000276C3AB |
| UniProt:K4CB81 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7:-:946720..955495
Molecular Weight (calculated)
89326.9 Da
IEP (calculated)
7.808
GRAVY (calculated)
-0.768
Length
781 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKKFKKKMH SICCDTDVAD RNTASALPVT NNIPLSKFLD MHPPRSPPQS KSRATAINNG EADYSGDEFH SARMNDVAGN DISGILYKWV NYGKGWRPRW
101: FALRDGVLSY YKVNGRHKIV TNSETEKGSM IIGEKSFRRI NTSSSTSSKS HRRKPCGVIH LKVSSIESRS DDRRFSINTG TKRLHLRAET KEDRRIWLEA
201: LTAAIKLFPT CDPVLEAQMN ENVSVSTEKL RQRLLEEGVS EVVIRDSEQI MRNEFAALHS HLQQVKRKQM LLLDKLGQLE TEKVDLENTL IDEGHRQARD
301: RQTYSEASLD KFRVFLGGSV SGSDNEEDDS DDEVDADSLF HDAKDALSSS SARSTDSDDE RSSFDSTVEF HPAEDGLSSG TRFATSDYPF VKRRKKLPEP
401: HEKEKGVGLW SMIKDNIGKD LTKVCLPVFF NEPLSSLQRC FEEFEYSYLL DQAYEWGKTG NSVMRILSVA AFAVSGYAST DGRMFKPFNP LLGETYEADY
501: PDKGLHFISE KVSHHPMILA CHCQGRGWKF WGDTNLKSKF WGRSIQLDPV GALTVEFDDG EVYQWGKVTT SIYNIIIGKL YCDHYGTMYI RGNRDYSCKL
601: KFKEQSIVER NPHQVHGVIH DKNGKRVATI NGKWDESLHY SMGDNPSDDV GQDSDSKSHL IWKRTKPSDF QTKYNLTQFA ITLNELSPDL KKKLPPTDSR
701: LRPDQRFLEN GEYDMADSEK LRLEQRQREA TKMQERGWQP RWFAKEKGSD TYKYKGGYWE ARQTGKWISC PHIFGEISQH T
101: FALRDGVLSY YKVNGRHKIV TNSETEKGSM IIGEKSFRRI NTSSSTSSKS HRRKPCGVIH LKVSSIESRS DDRRFSINTG TKRLHLRAET KEDRRIWLEA
201: LTAAIKLFPT CDPVLEAQMN ENVSVSTEKL RQRLLEEGVS EVVIRDSEQI MRNEFAALHS HLQQVKRKQM LLLDKLGQLE TEKVDLENTL IDEGHRQARD
301: RQTYSEASLD KFRVFLGGSV SGSDNEEDDS DDEVDADSLF HDAKDALSSS SARSTDSDDE RSSFDSTVEF HPAEDGLSSG TRFATSDYPF VKRRKKLPEP
401: HEKEKGVGLW SMIKDNIGKD LTKVCLPVFF NEPLSSLQRC FEEFEYSYLL DQAYEWGKTG NSVMRILSVA AFAVSGYAST DGRMFKPFNP LLGETYEADY
501: PDKGLHFISE KVSHHPMILA CHCQGRGWKF WGDTNLKSKF WGRSIQLDPV GALTVEFDDG EVYQWGKVTT SIYNIIIGKL YCDHYGTMYI RGNRDYSCKL
601: KFKEQSIVER NPHQVHGVIH DKNGKRVATI NGKWDESLHY SMGDNPSDDV GQDSDSKSHL IWKRTKPSDF QTKYNLTQFA ITLNELSPDL KKKLPPTDSR
701: LRPDQRFLEN GEYDMADSEK LRLEQRQREA TKMQERGWQP RWFAKEKGSD TYKYKGGYWE ARQTGKWISC PHIFGEISQH T
001: MHPFCCVTTV SDHSPSMPPL PEPQPPLPNY AADFGSARSE PIITRSASQS YNHSGQFNNN LIHSLSFNHH QSDVTDRLGQ RVLALPAAVR EPPVDVKIND
101: IVGNGIAGIL YKWVNYGRGW RPRWFVLQDG VLSYYKIHGP DKIFVSPETE KGSKVIGDES ARMISRHNRR GGSSSSCQLR RKPFGEVHLK VSSVRESRSD
201: DKRFSIFTGT KRLHLRAETR EDRTTWVEAL QAVKDMFPRM SNSELMAPTN NLAMSTEKIR LRLIEEGVSE LAIQDCEQIM KSEFSALQSQ LVLLKQKQWL
301: LIDTLRQLET EKVDLENTVV DESQRQADNG CSGELRHEKF SGTATESDDD NERGDAAEEE FDEEENTFFD TRDFLSSSSF KSSGSGFRTS SFSSDEDGFE
401: SEDDIDPSIK SIGCNYPRVK RRKNLPDPVE KEKSVSLWSM IKDNIGKDLT KVCLPVYFNE PLSSLQKCFE DLEYSYLLDR AFEYGKRGNS LMRILNVAAF
501: AVSGYASTEG RICKPFNPLL GETYEADYPD KGLRFFSEKV SHHPMVVACH CDGTGWKFWG DSNLRSKFWG RSIQLDPVGV LTLQFDDGEI LQWSKVTTSI
601: YNLILGKLYC DHYGTMRIEG SAEYSCKLKF KEQSIIDRNP HQVHGIVQNK SGKTVATMFG KWDESIHFVT GDCSGKGKLS EDMSGAQLLW KRSKPPGNAT
701: KYNLTRFAIT LNELTPGLKE RLPPTDSRLR PDQRYLENGE FEMANTEKLR LEQRQRQARK MQERGWKPRW FMKEKGSESY RYKGGYWEAR EDGSWVDCPD
801: IFGHIDSDQQ MIE
101: IVGNGIAGIL YKWVNYGRGW RPRWFVLQDG VLSYYKIHGP DKIFVSPETE KGSKVIGDES ARMISRHNRR GGSSSSCQLR RKPFGEVHLK VSSVRESRSD
201: DKRFSIFTGT KRLHLRAETR EDRTTWVEAL QAVKDMFPRM SNSELMAPTN NLAMSTEKIR LRLIEEGVSE LAIQDCEQIM KSEFSALQSQ LVLLKQKQWL
301: LIDTLRQLET EKVDLENTVV DESQRQADNG CSGELRHEKF SGTATESDDD NERGDAAEEE FDEEENTFFD TRDFLSSSSF KSSGSGFRTS SFSSDEDGFE
401: SEDDIDPSIK SIGCNYPRVK RRKNLPDPVE KEKSVSLWSM IKDNIGKDLT KVCLPVYFNE PLSSLQKCFE DLEYSYLLDR AFEYGKRGNS LMRILNVAAF
501: AVSGYASTEG RICKPFNPLL GETYEADYPD KGLRFFSEKV SHHPMVVACH CDGTGWKFWG DSNLRSKFWG RSIQLDPVGV LTLQFDDGEI LQWSKVTTSI
601: YNLILGKLYC DHYGTMRIEG SAEYSCKLKF KEQSIIDRNP HQVHGIVQNK SGKTVATMFG KWDESIHFVT GDCSGKGKLS EDMSGAQLLW KRSKPPGNAT
701: KYNLTRFAIT LNELTPGLKE RLPPTDSRLR PDQRYLENGE FEMANTEKLR LEQRQRQARK MQERGWKPRW FMKEKGSESY RYKGGYWEAR EDGSWVDCPD
801: IFGHIDSDQQ MIE
Arabidopsis Description
ORP1COxysterol-binding protein-related protein 1C [Source:UniProtKB/Swiss-Prot;Acc:Q8L751]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.