CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 3
mitochondrion 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63940	Soybean	nucleus, plastid	85.71	86.04
HORVU6Hr1G024620.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	7.64	79.22
HORVU2Hr1G031380.1	Barley	cytosol	30.95	72.65
HORVU3Hr1G049220.1	Barley	cytosol	15.79	70.79
VIT_07s0031g02980.t01	Wine grape	plastid	61.03	63.49
KRH53184	Soybean	plastid	62.41	63.12
KRH64734	Soybean	plastid	61.9	63.09
OQU91126	Sorghum	plastid	62.28	61.97
TraesCS4A01G271700.1	Wheat	plastid	62.28	61.89
TraesCS4B01G042300.2	Wheat	plastid	62.66	61.35
TraesCS4D01G039500.1	Wheat	plastid	62.66	61.12
KRH18807	Soybean	plastid	59.9	60.74
KRH16599	Soybean	plastid	59.65	60.71
Zm00001d033669_P003	Maize	plastid	62.28	60.61
GSMUA_Achr2P07260_001	Banana	plastid	52.63	59.57
Zm00001d013470_P007	Maize	plastid	60.4	59.0
GSMUA_Achr10P...	Banana	plastid	59.77	58.67
PGSC0003DMT400029169	Potato	nucleus	55.76	57.49
Solyc07g006100.2.1	Tomato	nucleus	55.76	56.98
Solyc12g010510.1.1	Tomato	cytosol, mitochondrion, plastid	46.24	56.25
PGSC0003DMT400020224	Potato	cytosol	45.74	55.9
KRH04091	Soybean	cytosol	49.62	51.56
KRH77382	Soybean	cytosol	49.12	50.91
KRH28046	Soybean	cytosol	48.75	50.78
KRH57364	Soybean	cytosol	49.0	50.78
KRH31371	Soybean	plastid	52.01	50.36
KRG97509	Soybean	plastid	51.75	50.18
KRG93817	Soybean	cytosol	4.76	42.22
GSMUA_Achr3P21140_001	Banana	nucleus	61.4	34.65
KRG99957	Soybean	cytosol, plastid	16.29	28.14
KRH49107	Soybean	endoplasmic reticulum	16.17	27.8
KRH29789	Soybean	endoplasmic reticulum	15.66	27.78
KRH24783	Soybean	plastid	15.54	27.56
KRH10248	Soybean	endoplasmic reticulum	15.54	27.19

Protein Annotations

EntrezGene:100781218	Gene3D:2.40.160.120	MapMan:35.1	EMBL:ACUP02003491	ncoils:Coil	EnsemblPlantsGene:GLYMA_06G159600
UniProt:I1KBS1	InterPro:IPR001849	EnsemblPlants:KRH53998	ProteinID:KRH53998	ProteinID:KRH53998.1	InterPro:OSBP_sf
InterPro:Oxysterol-bd	PFAM:PF01237	PFAM:PF15413	InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR10972
PANTHER:PTHR10972:SF100	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI00023C28B4	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:13160148..13170576

Molecular Weight (calculated)

91454.2 Da

IEP (calculated)

7.837

GRAVY (calculated)

-0.783

Length

798 amino acids

Sequence
(BLAST)

001: MNSFCGSQHC TKTSPARIPR KPASSTTTSD DDDKNHYQMA PSSMPPAFRF RSFSSCAHNR LSLASSSSSA VRRSASARFT RQHTTTRNEV MLNNIVGNGV
101: SGILYKWVNY GRGWRPRWFI LHDGVLSYYK IHGPDKLVLN REVETGAMVI GEESLRRINS HRHCPSRNRK PVSEIHLMVC SVRENSSDER RFSVSTGTKK
201: RLHLRAESRE DRASWVEAMS AVKDLFPRLP KSEAMSPFSS PLVSTQRLRD RLLMEGVRET AIREVEEIVK FEFSQLQKHI VALKQKQSLL MDTLRHLEAE
301: KVDLENTLID DQRQSKDETE SYLSTQEKYS EGSGDDSFEE HDGDDHSDDG DDAFYDTCDD ILSTTSSEHL RSCHDSEYEE TSPNGDEKSA IGSFGFNYPQ
401: IKRRKKFPDP VEKESSVSLW SIIKDNVGKD LTKVCLPVYF NEPLSSLQKC FEDLEYSFLL DQAYEWGKMG DSLKRMLHVA AFAVSGYAST NGRSCKPFNP
501: LLGETYEAEY QDKGIRFISE KVSHHPMIVA CHCEGSGWKF WGDSNLKSKF WGRSIQLDPV GLLTVEFDDG EVFHWSKVTT SIYNLILGKL YCDHYGTMRV
601: EGNREYSCKI KFKEQSIIDR NPHQIHGIVE DKKGRTVATI FGKWDESLHF IIGGNSGKGK RSSNVSSKPH LLWKRNPTPE YQTRYNLTQF AITLNEITPG
701: LKEKLPPTDS RLRPDQRCLE NGQHEMANSE KLRLEQRQRQ AQKMQEKGWK PRWFAKEKGN NSYRYVGGYW ETREKGNWES CPDIFGQFST DTDFNSTP

Best Arabidopsis Sequence Match ( AT2G31020.1 )
(BLAST)

001: MHPFCCVSDH SPSTPSFSMY AATPETPFGS ARSQPVITRS VSQRYNHPGQ SNHHHLLHSL SFNHQNVLAL PAAAREPPVD VKINDIAGNS IAGILYKWVN
101: YGKGWRPRWF VLQDGVLSYY KIKGPDKIVV IHETEKGSRV IGEESTRMIS RNKRHAATNN TNHQLRRKPF GEVHLKVSSI RESRSDDKRF SIFTGTKRLH
201: LRAETREDRE AWIEALQAVK DMFPRMSNCE LMAPTNNLDI SIEKLRLRLV EEGVSESAIQ DCEQITRSEF SAIQSQLLLL KQKQWLLIDT LRQLETEKVD
301: LENTVVDETQ RQAGNGDSEE TISESDDDNE QFDEAEEEMD TCDSLSSSSF KSIGSVFRTS SFSSDDDGLT NGFESENDDV DPSIKTIGFN YPHVKRRKKL
401: PDPVEKEKSV SLWSMIKDNI GKDLTKVCLP VYFNEPLSSL QKCFEDLEYS YLLDQASEWG KRGNNLMRIL NVAAFAVSGY ASTEGRICKP FNPMLGETYE
501: ADYPDKGLRF FSEKVSHHPM IVACHCDGTG WKFWGDSNLK SKFWGRSIQL DPIGLLTLQF DDGEIVQWSK VTTSIYNLIL GKLYCDHYGT MKIEGNGEYS
601: CKLKFKEQSM IDRNPHQVQG IVEDKNGKTV ARLFGKWDES IHYVMVDQGK VNESHLLWKR NKQPENPTKY NLTRFGITLN ELTPGLKEKL PPTDSRLRPD
701: QRYLEKGEYE MGNAEKLRLE QRQRQAREMQ ERGWKPKWFR KEKGSETYRY IGGYWEARDS GSWDDCPDIF GQVHQSIK

Arabidopsis Description

ORP1AORP1A [Source:UniProtKB/TrEMBL;Acc:A0A178VQE1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.