CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
cytosol 2
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31371	Soybean	plastid	96.6	96.48
HORVU0Hr1G010630.1	Barley	cytosol	10.57	82.86
VIT_01s0137g00290.t01	Wine grape	cytosol	79.1	81.78
Solyc05g013960.2.1	Tomato	cytosol	74.97	77.03
PGSC0003DMT400027973	Potato	cytosol	74.85	76.81
CDY19393	Canola	cytosol	70.96	75.06
CDX98007	Canola	cytosol	69.74	74.06
GSMUA_Achr9P02070_001	Banana	cytosol	67.31	73.67
GSMUA_Achr6P06750_001	Banana	cytosol	67.56	73.45
Bra019814.1-P	Field mustard	cytosol	72.54	72.89
AT1G13170.2	Thale cress	cytosol	72.17	70.97
Os12t0285600-01	Rice	cytosol	63.79	69.44
TraesCS5D01G120100.1	Wheat	cytosol	62.33	68.77
TraesCS5A01G117800.1	Wheat	cytosol	62.21	68.72
TraesCS5B01G116700.1	Wheat	cytosol	62.21	68.54
KXG23396	Sorghum	cytosol	61.36	68.43
Zm00001d030609_P002	Maize	cytosol	61.6	68.24
CDY51776	Canola	golgi	13.61	60.22
KRH53184	Soybean	plastid	56.62	59.06
KRH64734	Soybean	plastid	55.89	58.75
KRH16599	Soybean	plastid	55.65	58.42
KRH18807	Soybean	plastid	55.65	58.2
KRH04091	Soybean	cytosol	49.94	53.52
KRH77382	Soybean	cytosol	49.82	53.25
KRH57364	Soybean	cytosol	49.45	52.86
KRH28046	Soybean	cytosol	48.97	52.61
KRH53998	Soybean	plastid	50.18	51.75
KRH63940	Soybean	nucleus, plastid	49.94	51.7
KRG93817	Soybean	cytosol	4.37	40.0
KRG99957	Soybean	cytosol, plastid	16.65	29.65
KRH10248	Soybean	endoplasmic reticulum	15.67	28.29
KRH49107	Soybean	endoplasmic reticulum	15.8	28.02
KRH29789	Soybean	endoplasmic reticulum	15.31	28.0
KRH24783	Soybean	plastid	15.19	27.78

Protein Annotations

EntrezGene:100788779	Gene3D:2.40.160.120	MapMan:35.1	EMBL:ACUP02010799	ncoils:Coil	EnsemblPlantsGene:GLYMA_18G012500
UniProt:I1MYL8	InterPro:IPR001849	EnsemblPlants:KRG97509	ProteinID:KRG97509	ProteinID:KRG97509.1	InterPro:OSBP_sf
InterPro:Oxysterol-bd	PFAM:PF01237	PFAM:PF15413	InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR10972
PANTHER:PTHR10972:SF67	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI000233E579	SEG:seg

Description

hypothetical protein

Coordinates

chr18:+:880155..887466

Molecular Weight (calculated)

92901.2 Da

IEP (calculated)

5.649

GRAVY (calculated)

-0.594

Length

823 amino acids

Sequence
(BLAST)

001: MNPLCCIAPV SIDRDRANPV VAKSPSQCQL GLDASIRTVN YASKSSFSTQ DSSVGADSVK ATAAADLEEE EEPRDSKAFA GGNGGGVAGS VAGILYKWVN
101: YGKGWRSRWF VLEDGVLSYY KIHGPDKILM SPARDRSVRV IGEESSKFVK KANWNLNLNR ASSGGGVGGG NNSNNGKQCK PFGEIHLKVS SVRSSKSDDK
201: RLSIFTGTKT LHLRCVSRED RAMWIEALQS AKDLFPRALT SSDLATSEDI VVSTEKLRLR LSQEGISETI INDCESIMLS DVSYLQSKLK FLQQKHVMLL
301: DTLKQLETEK IELETTVVDE TKERESYCGQ GNRRFSDFYS VMSEGSVTDS VADNESQDGA DGETDDEDRT YFDTNEFLYS DALRCASYRS REGMGNASIS
401: DRDYICYDGV HGFEKEIKDV SYPYVKRRDN LPEPKEKEKP VGLWSIIKDN IGKDLSGVCL PVYFNEPLSS LQKCFEDLEY SYLVDRALEW GKQGNDLMRI
501: LNIAAFAVSS YASTEGRQCK PFNPLLGETY EADYPDKGLK FFSEKVSHHP MIVACHCEGR GWKFWADSNL KGKFWGRSIQ LDPVGVLTLQ FEDGETFQWS
601: KVTTSIYNII LGKIYCDHYG TMHIKGSGNY SCKLKFKEQS IIDRNPHQVH GFVQDNRTGE KVAMLIGKWD EAMYYVLGDP TTKPKGYDPM TEAALLWERD
701: NHVPKTRYNL SPFAISLNEI LPGLLEKLPP TDSRLRPDQR HLENGEYELA NAEKLRLEQL QRLARKMQER GWQPRWFKKD EDGCFRYIGG YWETREKNNW
801: NGIPDIFGQS CDLPSCSEET VSY

Best Arabidopsis Sequence Match ( AT1G13170.1 )
(BLAST)

001: MNPLCCIAPV SIDDRTNPVV AKSSNHHLGL EAIPVSKHAS KPSFSTQASW ISQDQLERLS SEVVDDVNLD GKDASSSSNK GCFFFGNCVG AGAGVAGIMY
101: KWVNYGKGWR ARWFELEDGV LSYYKIHGPD KIVMNPSREK GVRVIGEESV RYIRKASCGS SNRLGASAVA ASRPCKPFGE IHLKVSSIRA SKSDDKRLAI
201: FTGTKTLHLR CVSKENRAAW VEAFQVAKDL FPRVASGDIL PSEDAVVSTE KLREKLLQEG VGETVVKDCE AIMLSEVSVL QNRLKVLTHK HIILLDTLRQ
301: LETEKIELEA TVVDETKEHD SCCGQGRRFS DFYSVMSEVS ASDSEADNES QDGADVESDE DDVPYFDTND ILSAEAMRSA SYRSREAEGN GSIYDKDPFF
401: SDRLQIPARI PQYPYVRRRD NLPEPKEKEK PVGLWSIIKE NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLIDRALE WGKQGNELMR ILNIAAFAVS
501: GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PMIVACHCEG QGWNFWGDSN IKGKFWGRSI QLDPVGVLTL KFDDGEIYQW SKVTTSIYNI
601: ILGKLYCDHY GTMRIKGGSN YSCRLKFKEQ SVIDRNPRQV HGFVQDNRTG EKVAILIGKW DEAMYYVLGD PTTKPKGYDP MTEAVLLWER DKSPTKTRYN
701: LSPFAISLNE ITPGMIDKLP PTDSRLRPDQ RHLENGEYES ANAEKLRLEQ LQRQARRLQE KGWKPRWFEK DEEGNYRYLG GYWEAREKKD WDRITDIFKK
801: QQQRNSLSSS SSSTFL

Arabidopsis Description

ORP1DOSBP(Oxysterol binding protein)-related protein 1D [Source:UniProtKB/TrEMBL;Acc:F4HP28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.