Factsheet for Zm00001d030609_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG23396	Sorghum	cytosol	93.27	93.9
HORVU0Hr1G010630.1	Barley	cytosol	12.79	90.48
Os12t0285600-01	Rice	cytosol	85.2	83.73
TraesCS5B01G116700.1	Wheat	cytosol	81.97	81.53
TraesCS5D01G120100.1	Wheat	cytosol	81.83	81.5
TraesCS5A01G117800.1	Wheat	cytosol	81.43	81.21
GSMUA_Achr6P06750_001	Banana	cytosol	73.08	71.73
GSMUA_Achr9P02070_001	Banana	cytosol	72.14	71.28
VIT_01s0137g00290.t01	Wine grape	cytosol	70.79	66.08
PGSC0003DMT400027973	Potato	cytosol	69.58	64.46
Solyc05g013960.2.1	Tomato	cytosol	69.31	64.29
CDY19393	Canola	cytosol	67.16	64.14
CDX98007	Canola	cytosol	66.62	63.87
KRH31371	Soybean	plastid	68.78	62.01
KRG97509	Soybean	plastid	68.24	61.6
Bra019814.1-P	Field mustard	cytosol	67.29	61.05
AT1G13170.2	Thale cress	cytosol	67.56	59.98
CDY51776	Canola	golgi	14.8	59.14
Zm00001d033669_P003	Maize	plastid	58.68	53.17
Zm00001d013470_P007	Maize	plastid	56.93	51.77
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	49.53	50.07
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	46.97	46.16
Zm00001d048544_P003	Maize	cytosol	46.3	46.05
Zm00001d049556_P002	Maize	cytosol	44.01	44.43
Zm00001d028606_P002	Maize	cytosol	17.09	27.55
Zm00001d047812_P001	Maize	extracellular	17.23	27.47
Zm00001d037837_P002	Maize	endoplasmic reticulum, extracellular	9.96	24.03
Zm00001d034225_P002	Maize	endoplasmic reticulum, extracellular	11.17	23.31
Zm00001d012754_P001	Maize	cytosol	8.75	20.63
Zm00001d006081_P001	Maize	cytosol	4.44	19.53
Zm00001d052202_P001	Maize	cytosol	10.5	19.35
Zm00001d040358_P001	Maize	cytosol	11.44	16.67

Protein Annotations

EntrezGene:100383477	Gene3D:2.40.160.120	MapMan:35.1	EMBL:BT067318	UniProt:C0PG99	ncoils:Coil
InterPro:IPR001849	ProteinID:ONM01164.1	InterPro:OSBP_sf	InterPro:Oxysterol-bd	PFAM:PF01237	PFAM:PF15413
InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR10972	PANTHER:PTHR10972:SF67	SMART:SM00233	SUPFAM:SSF144000
SUPFAM:SSF50729	UniParc:UPI000195CA7C	EnsemblPlantsGene:Zm00001d030609	EnsemblPlants:Zm00001d030609_P002	EnsemblPlants:Zm00001d030609_T002	SEG:seg

Description

Oxysterol-binding protein-related protein 1D

Coordinates

chr1:+:148162035..148190548

Molecular Weight (calculated)

84176.6 Da

IEP (calculated)

6.816

GRAVY (calculated)

-0.537

Length

743 amino acids

Sequence
(BLAST)

001: MNPLCCIAPV SLEHAADQLH EHPQRILAGA PPATPAPKQD AVVGVLHKWV NYGKGWRSRW FVLEDGVLSY YKLRGAGAGG VAVSPAAAAA RVIGDGSAVQ
101: QAREVAAGAG KLWKPFGVIH LKVSSIRASK SDDKRLYIFS GTKTLHLRCE TEEDRNAWID ALLAAKDQFP RSQTSNDVGS MADIMLSSEK LRARLLQEGL
201: CEAVVRECES IMMSELLELH NHIKSQQQQH SILIDRLRQL ETEKVELERT VVHETKERET LGYANSRQSD FYSVLSGGST TESDPDTASH MAEVETEEDE
301: VTYFDTRDFL SAESLRSASC QRRELIAHGF GSEYVGDSVT NTVKTTKYPF VLRRDKLPEP KEKEKHIGLW SIIRENIGKD LSGVCLPVYF NEPLSSLQKC
401: FEDLEYSYLV DHALHWGKQG DSLMRILHVA AFAVSGYAST EGRQCKPFNP LLGETYEADY PDKGLRFFSE KVSHHPMVVA CHCDGRGWRF WGDSNLKGKF
501: WGRSIQLDPI GVLTLQFDDG ETFQWSKVTT SIYNIIIGKI YCDHYGTMRI NGSGQYSCKL KFKEQSIIDR NPHQVHGFVQ DNRTGQKVAM LIGKWDEAMY
601: YVLGDPSVKP KGYDPMSEAV LLWERDKSLN QTRYNLSPFA ISLNELTPHL LNKLAPTDSR LRPDQRHLEN GEYEMANSEK LRLEQLQRQA RQLQEKGWRP
701: RWFKKDDGDS YRYMGGYWEA RETGNWDGIP DIFRQNSLSP GLH

Best Arabidopsis Sequence Match ( AT1G13170.1 )
(BLAST)

001: MNPLCCIAPV SIDDRTNPVV AKSSNHHLGL EAIPVSKHAS KPSFSTQASW ISQDQLERLS SEVVDDVNLD GKDASSSSNK GCFFFGNCVG AGAGVAGIMY
101: KWVNYGKGWR ARWFELEDGV LSYYKIHGPD KIVMNPSREK GVRVIGEESV RYIRKASCGS SNRLGASAVA ASRPCKPFGE IHLKVSSIRA SKSDDKRLAI
201: FTGTKTLHLR CVSKENRAAW VEAFQVAKDL FPRVASGDIL PSEDAVVSTE KLREKLLQEG VGETVVKDCE AIMLSEVSVL QNRLKVLTHK HIILLDTLRQ
301: LETEKIELEA TVVDETKEHD SCCGQGRRFS DFYSVMSEVS ASDSEADNES QDGADVESDE DDVPYFDTND ILSAEAMRSA SYRSREAEGN GSIYDKDPFF
401: SDRLQIPARI PQYPYVRRRD NLPEPKEKEK PVGLWSIIKE NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLIDRALE WGKQGNELMR ILNIAAFAVS
501: GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PMIVACHCEG QGWNFWGDSN IKGKFWGRSI QLDPVGVLTL KFDDGEIYQW SKVTTSIYNI
601: ILGKLYCDHY GTMRIKGGSN YSCRLKFKEQ SVIDRNPRQV HGFVQDNRTG EKVAILIGKW DEAMYYVLGD PTTKPKGYDP MTEAVLLWER DKSPTKTRYN
701: LSPFAISLNE ITPGMIDKLP PTDSRLRPDQ RHLENGEYES ANAEKLRLEQ LQRQARRLQE KGWKPRWFEK DEEGNYRYLG GYWEAREKKD WDRITDIFKK
801: QQQRNSLSSS SSSTFL

Arabidopsis Description

ORP1DOSBP(Oxysterol binding protein)-related protein 1D [Source:UniProtKB/TrEMBL;Acc:F4HP28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.