Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G120100.1 | Wheat | cytosol | 99.06 | 99.2 |
| TraesCS5A01G117800.1 | Wheat | cytosol | 98.8 | 99.06 |
| HORVU0Hr1G010630.1 | Barley | cytosol | 13.39 | 95.24 |
| Os12t0285600-01 | Rice | cytosol | 85.68 | 84.66 |
| Zm00001d030609_P002 | Maize | cytosol | 81.53 | 81.97 |
| KXG23396 | Sorghum | cytosol | 80.72 | 81.71 |
| GSMUA_Achr9P02070_001 | Banana | cytosol | 71.22 | 70.74 |
| GSMUA_Achr6P06750_001 | Banana | cytosol | 70.82 | 69.88 |
| VIT_01s0137g00290.t01 | Wine grape | cytosol | 70.68 | 66.33 |
| CDY19393 | Canola | cytosol | 66.67 | 64.01 |
| CDX98007 | Canola | cytosol | 66.27 | 63.87 |
| PGSC0003DMT400027973 | Potato | cytosol | 68.54 | 63.84 |
| Solyc05g013960.2.1 | Tomato | cytosol | 68.41 | 63.8 |
| KRH31371 | Soybean | plastid | 68.94 | 62.5 |
| KRG97509 | Soybean | plastid | 68.54 | 62.21 |
| Bra019814.1-P | Field mustard | cytosol | 67.07 | 61.17 |
| AT1G13170.2 | Thale cress | cytosol | 68.27 | 60.93 |
| CDY51776 | Canola | golgi | 13.92 | 55.91 |
| TraesCS4B01G042300.2 | Wheat | plastid | 58.5 | 53.62 |
| TraesCS7B01G202100.1 | Wheat | cytosol | 49.8 | 50.2 |
| TraesCS1B01G224800.1 | Wheat | cytosol | 49.26 | 49.6 |
| TraesCS4B01G375900.1 | Wheat | cytosol | 47.39 | 49.17 |
| TraesCS4B01G207800.1 | Wheat | cytosol | 17.0 | 27.43 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G116700.1 | EnsemblPlantsGene:TraesCS5B01G116700 | Gene3D:2.40.160.120 | InterPro:IPR001849 | InterPro:OSBP_sf | InterPro:Oxysterol-bd |
| InterPro:PH_domain | ncoils:Coil | PANTHER:PTHR10972 | PANTHER:PTHR10972:SF67 | PFAM:PF01237 | PFAM:PF15413 |
| PFscan:PS50003 | SEG:seg | SMART:SM00233 | SUPFAM:SSF144000 | SUPFAM:SSF50729 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5B:+:202198287..202223282
Molecular Weight (calculated)
84943.1 Da
IEP (calculated)
6.588
GRAVY (calculated)
-0.607
Length
747 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPLCCIAPV SVDYAADHHH HHQPRSVAAA TLSATPEAAP PQPTPPVVSG VLHKWVNYGK GWRSRWFVLE DGVLSYYKLR DGGGESGESS ASTAAARVIG
101: EGDALRRARE DAAAAGKQWK PFGDIHLKVS SIRASRSDDK RLYIFSGTKT LHLRCETEED RNAWLEALLV AKDRFPRSLM TNDFAPVADI MLSTEKLRMR
201: LLHEGLNETV VNECESIMMT ELLELHSQIK SQQQQHSVLV DRLRQLETEK VELERTVVHE TKEREAHGYV NGRYSDFYSV LSGGSASESD PDTASQVADA
301: ESDEDEVTYF DTRDFLSVES LRSASRRREL VTNGCNALES IGDSRSYTAK FTKYPIVERR DKLPEPKEKE KPIGLWSIIK ENIGKDLSGV CLPVYFNEPL
401: SSLQKCFEDL EYSYLVDNAL QWGKQGDSLM RTLLVAAFAV SSYASTEGRQ CKPFNPLLGE TYEADYPDKG LRFFSEKVSH HPVVVACHCD GRGWKFWGDS
501: NLRGKFWGRS IQLDPIGVLT LQFDDGEKFQ WSKVTTSIYN IIIGKIYCDH YGTMHIKGSS QYSCKLKFKE LSIIDRNPHQ VQGYVQDNRT GKKVAMLIGK
601: WDEAMYYVLG DPSAKPKWYD PMSEAVLLWE RDKSLNQTRY NLSPFAISLN ELPPHMLTML PPTDSRLRPD QRHLENGEYE KANSEKLRLE QLQRQARRLQ
701: EKGWQPRWFR KDEDDSYCYL GGYWEAREKG NWDGIPHIFG QSSASTG
101: EGDALRRARE DAAAAGKQWK PFGDIHLKVS SIRASRSDDK RLYIFSGTKT LHLRCETEED RNAWLEALLV AKDRFPRSLM TNDFAPVADI MLSTEKLRMR
201: LLHEGLNETV VNECESIMMT ELLELHSQIK SQQQQHSVLV DRLRQLETEK VELERTVVHE TKEREAHGYV NGRYSDFYSV LSGGSASESD PDTASQVADA
301: ESDEDEVTYF DTRDFLSVES LRSASRRREL VTNGCNALES IGDSRSYTAK FTKYPIVERR DKLPEPKEKE KPIGLWSIIK ENIGKDLSGV CLPVYFNEPL
401: SSLQKCFEDL EYSYLVDNAL QWGKQGDSLM RTLLVAAFAV SSYASTEGRQ CKPFNPLLGE TYEADYPDKG LRFFSEKVSH HPVVVACHCD GRGWKFWGDS
501: NLRGKFWGRS IQLDPIGVLT LQFDDGEKFQ WSKVTTSIYN IIIGKIYCDH YGTMHIKGSS QYSCKLKFKE LSIIDRNPHQ VQGYVQDNRT GKKVAMLIGK
601: WDEAMYYVLG DPSAKPKWYD PMSEAVLLWE RDKSLNQTRY NLSPFAISLN ELPPHMLTML PPTDSRLRPD QRHLENGEYE KANSEKLRLE QLQRQARRLQ
701: EKGWQPRWFR KDEDDSYCYL GGYWEAREKG NWDGIPHIFG QSSASTG
001: MNPLCCIAPV SIDDRTNPVV AKSSNHHLGL EAIPVSKHAS KPSFSTQASW ISQDQLERLS SEVVDDVNLD GKDASSSSNK GCFFFGNCVG AGAGVAGIMY
101: KWVNYGKGWR ARWFELEDGV LSYYKIHGPD KIVMNPSREK GVRVIGEESV RYIRKASCGS SNRLGASAVA ASRPCKPFGE IHLKVSSIRA SKSDDKRLAI
201: FTGTKTLHLR CVSKENRAAW VEAFQVAKDL FPRVASGDIL PSEDAVVSTE KLREKLLQEG VGETVVKDCE AIMLSEVSVL QNRLKVLTHK HIILLDTLRQ
301: LETEKIELEA TVVDETKEHD SCCGQGRRFS DFYSVMSEVS ASDSEADNES QDGADVESDE DDVPYFDTND ILSAEAMRSA SYRSREAEGN GSIYDKDPFF
401: SDRLQIPARI PQYPYVRRRD NLPEPKEKEK PVGLWSIIKE NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLIDRALE WGKQGNELMR ILNIAAFAVS
501: GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PMIVACHCEG QGWNFWGDSN IKGKFWGRSI QLDPVGVLTL KFDDGEIYQW SKVTTSIYNI
601: ILGKLYCDHY GTMRIKGGSN YSCRLKFKEQ SVIDRNPRQV HGFVQDNRTG EKVAILIGKW DEAMYYVLGD PTTKPKGYDP MTEAVLLWER DKSPTKTRYN
701: LSPFAISLNE ITPGMIDKLP PTDSRLRPDQ RHLENGEYES ANAEKLRLEQ LQRQARRLQE KGWKPRWFEK DEEGNYRYLG GYWEAREKKD WDRITDIFKK
801: QQQRNSLSSS SSSTFL
101: KWVNYGKGWR ARWFELEDGV LSYYKIHGPD KIVMNPSREK GVRVIGEESV RYIRKASCGS SNRLGASAVA ASRPCKPFGE IHLKVSSIRA SKSDDKRLAI
201: FTGTKTLHLR CVSKENRAAW VEAFQVAKDL FPRVASGDIL PSEDAVVSTE KLREKLLQEG VGETVVKDCE AIMLSEVSVL QNRLKVLTHK HIILLDTLRQ
301: LETEKIELEA TVVDETKEHD SCCGQGRRFS DFYSVMSEVS ASDSEADNES QDGADVESDE DDVPYFDTND ILSAEAMRSA SYRSREAEGN GSIYDKDPFF
401: SDRLQIPARI PQYPYVRRRD NLPEPKEKEK PVGLWSIIKE NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLIDRALE WGKQGNELMR ILNIAAFAVS
501: GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PMIVACHCEG QGWNFWGDSN IKGKFWGRSI QLDPVGVLTL KFDDGEIYQW SKVTTSIYNI
601: ILGKLYCDHY GTMRIKGGSN YSCRLKFKEQ SVIDRNPRQV HGFVQDNRTG EKVAILIGKW DEAMYYVLGD PTTKPKGYDP MTEAVLLWER DKSPTKTRYN
701: LSPFAISLNE ITPGMIDKLP PTDSRLRPDQ RHLENGEYES ANAEKLRLEQ LQRQARRLQE KGWKPRWFEK DEEGNYRYLG GYWEAREKKD WDRITDIFKK
801: QQQRNSLSSS SSSTFL
Arabidopsis Description
ORP1DOSBP(Oxysterol binding protein)-related protein 1D [Source:UniProtKB/TrEMBL;Acc:F4HP28]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.