Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G116700.1 | Wheat | cytosol | 99.2 | 99.06 |
| TraesCS5A01G117800.1 | Wheat | cytosol | 98.79 | 98.93 |
| HORVU0Hr1G010630.1 | Barley | cytosol | 13.67 | 97.14 |
| Os12t0285600-01 | Rice | cytosol | 85.66 | 84.52 |
| Zm00001d030609_P002 | Maize | cytosol | 81.5 | 81.83 |
| KXG23396 | Sorghum | cytosol | 80.56 | 81.44 |
| GSMUA_Achr9P02070_001 | Banana | cytosol | 71.58 | 71.01 |
| GSMUA_Achr6P06750_001 | Banana | cytosol | 71.05 | 70.01 |
| VIT_01s0137g00290.t01 | Wine grape | cytosol | 70.91 | 66.46 |
| PGSC0003DMT400027973 | Potato | cytosol | 69.03 | 64.21 |
| Solyc05g013960.2.1 | Tomato | cytosol | 68.9 | 64.17 |
| CDY19393 | Canola | cytosol | 66.89 | 64.14 |
| CDX98007 | Canola | cytosol | 66.49 | 64.0 |
| KRH31371 | Soybean | plastid | 69.17 | 62.62 |
| KRG97509 | Soybean | plastid | 68.77 | 62.33 |
| Bra019814.1-P | Field mustard | cytosol | 67.29 | 61.29 |
| AT1G13170.2 | Thale cress | cytosol | 68.5 | 61.05 |
| CDY51776 | Canola | golgi | 14.08 | 56.45 |
| TraesCS4D01G039500.1 | Wheat | plastid | 58.45 | 53.3 |
| TraesCS7D01G297200.3 | Wheat | cytosol | 49.73 | 50.14 |
| TraesCS1D01G214100.1 | Wheat | cytosol | 49.2 | 49.46 |
| TraesCS4D01G361400.2 | Wheat | cytosol, nucleus, plasma membrane | 44.5 | 45.05 |
| TraesCS4D01G208700.1 | Wheat | golgi | 17.02 | 27.43 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G120100.1 | EnsemblPlantsGene:TraesCS5D01G120100 | Gene3D:2.40.160.120 | InterPro:IPR001849 | InterPro:OSBP_sf | InterPro:Oxysterol-bd |
| InterPro:PH_domain | ncoils:Coil | PANTHER:PTHR10972 | PANTHER:PTHR10972:SF67 | PFAM:PF01237 | PFAM:PF15413 |
| PFscan:PS50003 | SEG:seg | SMART:SM00233 | SUPFAM:SSF144000 | SUPFAM:SSF50729 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5D:-:168494273..168510878
Molecular Weight (calculated)
84898.1 Da
IEP (calculated)
6.588
GRAVY (calculated)
-0.595
Length
746 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPLCCIAPV SVDYAADHHH HHQPRSVAAA TLSATPEAAP PQTTPPVVSG VLHKWVNYGK GWRSRWFVLE DGVLSYYKLR DGGGESGESS ASTAAARVIG
101: EGDALRRARE DAAAAGKQWK PFGDIHLKVS SIRASRSDDK RLYIFSGTKT LHLRCETEED RNAWLEALLV AKDRFPRSLM TNDFAPVADI MLSTEKLRMR
201: LLHEGLNETV VNECESIMMT ELLELHNQIK SQQQQHSVLV DRLRQLETEK VELERTVVHE TKEREAHGYV NGRYSDFYSV LSGGSASESD PDTASQVADA
301: ESEDEVTYFD TRDFLSVESL RSASRRRELV TNGCNALESI GDSRSYTAKF TKYPIVERRD KLPEPKEKEK PIGLWSIIKE NIGKDLSGVC LPVYFNEPLS
401: SLQKCFEDLE YSYLVDNALQ WGKQGDSLMR TLLVAAFAVS SYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PVVVACHCDG RGWKFWGDSN
501: LRGKFWGRSI QLDPIGVLTL QFDDGEKFQW SKVTTSIYNI IIGKIYCDHY GTMHIKGSSR YSCKLKFKEL SIIDRNPHQV QGFVQDNRTG EKVAMLIGKW
601: DEAMYYVLGD PSAKPKWYDP MSEAVLLWER DKSLNQTRYN LSPFAISLNE LPPHMLTMLP PTDSRLRPDQ RHLENGEYEK ANSEKLRLEQ LQRQARRLQE
701: KGWQPRWFRK DEDDSYCYLG GYWEAREKGN WDGIPHIFGQ SSALTG
101: EGDALRRARE DAAAAGKQWK PFGDIHLKVS SIRASRSDDK RLYIFSGTKT LHLRCETEED RNAWLEALLV AKDRFPRSLM TNDFAPVADI MLSTEKLRMR
201: LLHEGLNETV VNECESIMMT ELLELHNQIK SQQQQHSVLV DRLRQLETEK VELERTVVHE TKEREAHGYV NGRYSDFYSV LSGGSASESD PDTASQVADA
301: ESEDEVTYFD TRDFLSVESL RSASRRRELV TNGCNALESI GDSRSYTAKF TKYPIVERRD KLPEPKEKEK PIGLWSIIKE NIGKDLSGVC LPVYFNEPLS
401: SLQKCFEDLE YSYLVDNALQ WGKQGDSLMR TLLVAAFAVS SYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PVVVACHCDG RGWKFWGDSN
501: LRGKFWGRSI QLDPIGVLTL QFDDGEKFQW SKVTTSIYNI IIGKIYCDHY GTMHIKGSSR YSCKLKFKEL SIIDRNPHQV QGFVQDNRTG EKVAMLIGKW
601: DEAMYYVLGD PSAKPKWYDP MSEAVLLWER DKSLNQTRYN LSPFAISLNE LPPHMLTMLP PTDSRLRPDQ RHLENGEYEK ANSEKLRLEQ LQRQARRLQE
701: KGWQPRWFRK DEDDSYCYLG GYWEAREKGN WDGIPHIFGQ SSALTG
001: MNPLCCIAPV SIDDRTNPVV AKSSNHHLGL EAIPVSKHAS KPSFSTQASW ISQDQLERLS SEVVDDVNLD GKDASSSSNK GCFFFGNCVG AGAGVAGIMY
101: KWVNYGKGWR ARWFELEDGV LSYYKIHGPD KIVMNPSREK GVRVIGEESV RYIRKASCGS SNRLGASAVA ASRPCKPFGE IHLKVSSIRA SKSDDKRLAI
201: FTGTKTLHLR CVSKENRAAW VEAFQVAKDL FPRVASGDIL PSEDAVVSTE KLREKLLQEG VGETVVKDCE AIMLSEVSVL QNRLKVLTHK HIILLDTLRQ
301: LETEKIELEA TVVDETKEHD SCCGQGRRFS DFYSVMSEVS ASDSEADNES QDGADVESDE DDVPYFDTND ILSAEAMRSA SYRSREAEGN GSIYDKDPFF
401: SDRLQIPARI PQYPYVRRRD NLPEPKEKEK PVGLWSIIKE NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLIDRALE WGKQGNELMR ILNIAAFAVS
501: GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PMIVACHCEG QGWNFWGDSN IKGKFWGRSI QLDPVGVLTL KFDDGEIYQW SKVTTSIYNI
601: ILGKLYCDHY GTMRIKGGSN YSCRLKFKEQ SVIDRNPRQV HGFVQDNRTG EKVAILIGKW DEAMYYVLGD PTTKPKGYDP MTEAVLLWER DKSPTKTRYN
701: LSPFAISLNE ITPGMIDKLP PTDSRLRPDQ RHLENGEYES ANAEKLRLEQ LQRQARRLQE KGWKPRWFEK DEEGNYRYLG GYWEAREKKD WDRITDIFKK
801: QQQRNSLSSS SSSTFL
101: KWVNYGKGWR ARWFELEDGV LSYYKIHGPD KIVMNPSREK GVRVIGEESV RYIRKASCGS SNRLGASAVA ASRPCKPFGE IHLKVSSIRA SKSDDKRLAI
201: FTGTKTLHLR CVSKENRAAW VEAFQVAKDL FPRVASGDIL PSEDAVVSTE KLREKLLQEG VGETVVKDCE AIMLSEVSVL QNRLKVLTHK HIILLDTLRQ
301: LETEKIELEA TVVDETKEHD SCCGQGRRFS DFYSVMSEVS ASDSEADNES QDGADVESDE DDVPYFDTND ILSAEAMRSA SYRSREAEGN GSIYDKDPFF
401: SDRLQIPARI PQYPYVRRRD NLPEPKEKEK PVGLWSIIKE NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLIDRALE WGKQGNELMR ILNIAAFAVS
501: GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PMIVACHCEG QGWNFWGDSN IKGKFWGRSI QLDPVGVLTL KFDDGEIYQW SKVTTSIYNI
601: ILGKLYCDHY GTMRIKGGSN YSCRLKFKEQ SVIDRNPRQV HGFVQDNRTG EKVAILIGKW DEAMYYVLGD PTTKPKGYDP MTEAVLLWER DKSPTKTRYN
701: LSPFAISLNE ITPGMIDKLP PTDSRLRPDQ RHLENGEYES ANAEKLRLEQ LQRQARRLQE KGWKPRWFEK DEEGNYRYLG GYWEAREKKD WDRITDIFKK
801: QQQRNSLSSS SSSTFL
Arabidopsis Description
ORP1DOSBP(Oxysterol binding protein)-related protein 1D [Source:UniProtKB/TrEMBL;Acc:F4HP28]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.