Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400027973 | Potato | cytosol | 99.13 | 99.0 |
| HORVU0Hr1G010630.1 | Barley | cytosol | 10.86 | 82.86 |
| VIT_01s0137g00290.t01 | Wine grape | cytosol | 78.53 | 79.02 |
| KRH31371 | Soybean | plastid | 77.15 | 75.0 |
| KRG97509 | Soybean | plastid | 77.03 | 74.97 |
| GSMUA_Achr9P02070_001 | Banana | cytosol | 69.04 | 73.54 |
| GSMUA_Achr6P06750_001 | Banana | cytosol | 69.29 | 73.32 |
| CDY19393 | Canola | cytosol | 70.29 | 72.36 |
| CDX98007 | Canola | cytosol | 69.79 | 72.13 |
| Os12t0285600-01 | Rice | cytosol | 66.92 | 70.9 |
| Bra019814.1-P | Field mustard | cytosol | 71.66 | 70.09 |
| Zm00001d030609_P002 | Maize | cytosol | 64.29 | 69.31 |
| KXG23396 | Sorghum | cytosol | 63.67 | 69.11 |
| TraesCS5D01G120100.1 | Wheat | cytosol | 64.17 | 68.9 |
| TraesCS5A01G117800.1 | Wheat | cytosol | 63.8 | 68.59 |
| AT1G13170.2 | Thale cress | cytosol | 71.66 | 68.58 |
| TraesCS5B01G116700.1 | Wheat | cytosol | 63.8 | 68.41 |
| CDY51776 | Canola | golgi | 14.36 | 61.83 |
| Solyc08g078960.2.1 | Tomato | cytosol | 38.95 | 60.35 |
| Solyc11g013190.1.1 | Tomato | nucleus, plastid | 55.68 | 54.99 |
| Solyc12g010510.1.1 | Tomato | cytosol, mitochondrion, plastid | 44.07 | 53.81 |
| Solyc07g006100.2.1 | Tomato | nucleus | 50.06 | 51.34 |
| Solyc10g084800.1.1 | Tomato | extracellular, plastid | 16.1 | 28.17 |
Protein Annotations
| EnsemblPlants:Solyc05g013960.2.1 | EnsemblPlantsGene:Solyc05g013960.2 | Gene3D:2.40.160.120 | InterPro:IPR001849 | InterPro:OSBP_sf | InterPro:Oxysterol-bd |
| InterPro:PH_domain | ncoils:Coil | PANTHER:PTHR10972 | PANTHER:PTHR10972:SF67 | PFAM:PF01237 | PFAM:PF15413 |
| PFscan:PS50003 | SEG:seg | SMART:SM00233 | SUPFAM:SSF144000 | SUPFAM:SSF50729 | UniParc:UPI00027662A6 |
| UniProt:K4BYB7 | MapMan:35.1 | : | : | : | : |
Description
Oxysterol-binding protein-related protein 1D [Source:Projected from Arabidopsis thaliana (AT1G13170) UniProtKB/Swiss-Prot;Acc:Q9SAF0]
Coordinates
chr5:+:7434048..7442037
Molecular Weight (calculated)
90849.0 Da
IEP (calculated)
6.202
GRAVY (calculated)
-0.639
Length
801 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPLCCIAPV SIDRDKGNPA VVKSQSVTQS QLGFDNNVGV KPVSFSLRQS FTNAQVNTDS DLGLVNENEE NGNDSKEFKG SVSVAGVLYK WVNYGKGWRA
101: RWFVLEDGVL SYYKVHGPDK IAMSPGKEKG LKVIGDESWR YMRKANVNNN RLNGSNKWKP FGEIHLKVSS VRASKSDDKR LSIFTGTKTL HLRCQSREDR
201: TTWIEALGVA KDQFPRLLSS GDFASSEDFI VSTEKLRSRL VQEGMGEAVI KDCESIMLHE VAELQNQMKA LQLKHVMLLD TLRQLETDKI ELETTVVDET
301: KERDSCCGQG RRFSDFYSIM SEGSASDSDA DNESRYGGDA ETDEEDGAFF DTNDFLSAES LRSASYRSRE GIGNACSSLT SENVTITGHT REEMEVKTIS
401: YPYIKRRDNL PEPKEKDKPV GLWSIIKDNI GKDLSGVCLP VYFNEPLSSL QKCFEDLEYS HLVDQALEWG KQGDDLMRIL KIAAFAVSGY ASTQGRQCKP
501: FNPLLGETYE ADYPDKGLHF FSEKVSHHPM VVACHCEGRG WKFWADSNLK GKFWGRSIQL DPVGVLTLQF EDGETFQWSK VTTSIYNIII GKIYCDHYGA
601: MRIKGSGKYS CKLKFKEQSI IDRNPHQVHG FVQDNRTGEK VAMLLGKWDE AMYYVLGDPT TKPKGYDPMT EAILLWERDK STPKTRYNLT PFAISLNELT
701: PGLREKLPPT DSRLRPDQRH LENGEYELAN AEKLRLEQLQ RQARKLQERG WRPRWFSKDE DGCYRYVGGY WEAKEKHNWE GISDIFGHTG DPSPVIEEFA
801: C
101: RWFVLEDGVL SYYKVHGPDK IAMSPGKEKG LKVIGDESWR YMRKANVNNN RLNGSNKWKP FGEIHLKVSS VRASKSDDKR LSIFTGTKTL HLRCQSREDR
201: TTWIEALGVA KDQFPRLLSS GDFASSEDFI VSTEKLRSRL VQEGMGEAVI KDCESIMLHE VAELQNQMKA LQLKHVMLLD TLRQLETDKI ELETTVVDET
301: KERDSCCGQG RRFSDFYSIM SEGSASDSDA DNESRYGGDA ETDEEDGAFF DTNDFLSAES LRSASYRSRE GIGNACSSLT SENVTITGHT REEMEVKTIS
401: YPYIKRRDNL PEPKEKDKPV GLWSIIKDNI GKDLSGVCLP VYFNEPLSSL QKCFEDLEYS HLVDQALEWG KQGDDLMRIL KIAAFAVSGY ASTQGRQCKP
501: FNPLLGETYE ADYPDKGLHF FSEKVSHHPM VVACHCEGRG WKFWADSNLK GKFWGRSIQL DPVGVLTLQF EDGETFQWSK VTTSIYNIII GKIYCDHYGA
601: MRIKGSGKYS CKLKFKEQSI IDRNPHQVHG FVQDNRTGEK VAMLLGKWDE AMYYVLGDPT TKPKGYDPMT EAILLWERDK STPKTRYNLT PFAISLNELT
701: PGLREKLPPT DSRLRPDQRH LENGEYELAN AEKLRLEQLQ RQARKLQERG WRPRWFSKDE DGCYRYVGGY WEAKEKHNWE GISDIFGHTG DPSPVIEEFA
801: C
001: MNPLCCIAPV SIDDRTNPVV AKSSNHHLGL EAIPVSKHAS KPSFSTQASW ISQDQLERLS SEVVDDVNLD GKDASSSSNK GCFFFGNCVG AGAGVAGIMY
101: KWVNYGKGWR ARWFELEDGV LSYYKIHGPD KIVMNPSREK GVRVIGEESV RYIRKASCGS SNRLGASAVA ASRPCKPFGE IHLKVSSIRA SKSDDKRLAI
201: FTGTKTLHLR CVSKENRAAW VEAFQVAKDL FPRVASGDIL PSEDAVVSTE KLREKLLQEG VGETVVKDCE AIMLSEVSVL QNRLKVLTHK HIILLDTLRQ
301: LETEKIELEA TVVDETKEHD SCCGQGRRFS DFYSVMSEVS ASDSEADNES QDGADVESDE DDVPYFDTND ILSAEAMRSA SYRSREAEGN GSIYDKDPFF
401: SDRLQIPARI PQYPYVRRRD NLPEPKEKEK PVGLWSIIKE NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLIDRALE WGKQGNELMR ILNIAAFAVS
501: GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PMIVACHCEG QGWNFWGDSN IKGKFWGRSI QLDPVGVLTL KFDDGEIYQW SKVTTSIYNI
601: ILGKLYCDHY GTMRIKGGSN YSCRLKFKEQ SVIDRNPRQV HGFVQDNRTG EKVAILIGKW DEAMYYVLGD PTTKPKGYDP MTEAVLLWER DKSPTKTRYN
701: LSPFAISLNE ITPGMIDKLP PTDSRLRPDQ RHLENGEYES ANAEKLRLEQ LQRQARRLQE KGWKPRWFEK DEEGNYRYLG GYWEAREKKD WDRITDIFKK
801: QQQRNSLSSS SSSTFL
101: KWVNYGKGWR ARWFELEDGV LSYYKIHGPD KIVMNPSREK GVRVIGEESV RYIRKASCGS SNRLGASAVA ASRPCKPFGE IHLKVSSIRA SKSDDKRLAI
201: FTGTKTLHLR CVSKENRAAW VEAFQVAKDL FPRVASGDIL PSEDAVVSTE KLREKLLQEG VGETVVKDCE AIMLSEVSVL QNRLKVLTHK HIILLDTLRQ
301: LETEKIELEA TVVDETKEHD SCCGQGRRFS DFYSVMSEVS ASDSEADNES QDGADVESDE DDVPYFDTND ILSAEAMRSA SYRSREAEGN GSIYDKDPFF
401: SDRLQIPARI PQYPYVRRRD NLPEPKEKEK PVGLWSIIKE NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLIDRALE WGKQGNELMR ILNIAAFAVS
501: GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PMIVACHCEG QGWNFWGDSN IKGKFWGRSI QLDPVGVLTL KFDDGEIYQW SKVTTSIYNI
601: ILGKLYCDHY GTMRIKGGSN YSCRLKFKEQ SVIDRNPRQV HGFVQDNRTG EKVAILIGKW DEAMYYVLGD PTTKPKGYDP MTEAVLLWER DKSPTKTRYN
701: LSPFAISLNE ITPGMIDKLP PTDSRLRPDQ RHLENGEYES ANAEKLRLEQ LQRQARRLQE KGWKPRWFEK DEEGNYRYLG GYWEAREKKD WDRITDIFKK
801: QQQRNSLSSS SSSTFL
Arabidopsis Description
ORP1DOSBP(Oxysterol binding protein)-related protein 1D [Source:UniProtKB/TrEMBL;Acc:F4HP28]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.