Factsheet for Zm00001d028606_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047812_P001	Maize	extracellular	94.58	93.56
OQU92826	Sorghum	cytosol	95.66	89.45
Os03t0274000-01	Rice	plasma membrane	89.59	89.2
TraesCS4D01G208700.1	Wheat	golgi	86.77	86.39
TraesCS4B01G207800.1	Wheat	cytosol	86.55	86.18
HORVU4Hr1G059840.1	Barley	cytosol	86.33	85.78
TraesCS4A01G096600.1	Wheat	cytosol	86.12	85.75
GSMUA_Achr9P03900_001	Banana	cytosol	81.56	82.28
GSMUA_Achr1P17320_001	Banana	cytosol	80.48	80.48
KRH10248	Soybean	endoplasmic reticulum	77.22	78.07
KRH29789	Soybean	endoplasmic reticulum	75.7	77.56
VIT_06s0004g04930.t01	Wine grape	cytosol	76.14	76.97
KRH24783	Soybean	plastid	74.84	76.67
CDX80271	Canola	cytosol	75.7	76.2
Bra002568.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	75.49	76.15
CDY33036	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	75.27	75.93
KRH49107	Soybean	endoplasmic reticulum	75.7	75.22
VIT_08s0007g00480.t01	Wine grape	cytosol	72.67	75.11
KRG99957	Soybean	cytosol, plastid	75.27	75.11
AT5G59420.1	Thale cress	cytosol, plastid	74.4	75.05
KRG93817	Soybean	cytosol	14.32	73.33
Solyc10g084800.1.1	Tomato	extracellular, plastid	72.02	72.49
Zm00001d006081_P001	Maize	cytosol	25.6	69.82
Zm00001d012754_P001	Maize	cytosol	45.34	66.35
Zm00001d037837_P002	Maize	endoplasmic reticulum, extracellular	44.25	66.23
PGSC0003DMT400028593	Potato	cytosol, plastid	71.8	65.81
Zm00001d034225_P002	Maize	endoplasmic reticulum, extracellular	48.16	62.36
Zm00001d052202_P001	Maize	cytosol	47.29	54.09
Zm00001d040358_P001	Maize	cytosol	47.94	43.33
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	29.28	18.37
Zm00001d030609_P002	Maize	cytosol	27.55	17.09
Zm00001d048544_P003	Maize	cytosol	27.11	16.73
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	26.46	16.14
Zm00001d033669_P003	Maize	plastid	28.63	16.1
Zm00001d013470_P007	Maize	plastid	28.2	15.91
Zm00001d049556_P002	Maize	cytosol	23.21	14.54

Protein Annotations

EMBL:BT086009	EnsemblPlants:Zm00001d028606_P002	EnsemblPlants:Zm00001d028606_T002	EnsemblPlantsGene:Zm00001d028606	EntrezGene:100285774	Gene3D:1.20.120.1290
Gene3D:2.40.160.120	InterPro:OSBP_sf	InterPro:Oxysterol-bd	PANTHER:PTHR10972	PANTHER:PTHR10972:SF136	PFAM:PF01237
ProteinID:ONL96548.1	ProteinID:ONL96549.1	SEG:seg	SUPFAM:SSF144000	UniParc:UPI0001A4BDFA	UniProt:C4J5B2
MapMan:5.8.1.1	:	:	:	:	:

Description

Oxysterol-binding protein-related protein 3B

Coordinates

chr1:+:40594616..40599175

Molecular Weight (calculated)

51959.2 Da

IEP (calculated)

5.069

GRAVY (calculated)

-0.541

Length

461 amino acids

Sequence
(BLAST)

001: MGSKDQDGGA ASSGGGFFSS FAAGMRSWGT AVHKSVNGLL GYEGLEVINP DGGTDDAEEE ALKGRWKQED RDSYWKMMHK YIGSDVTSLV TLPVIIFEPM
101: TMLQKMAELM EYCELLDKAD ECEDPYMCMV YASTWAVSVY FAYQRTWKPF NPILGETYEM VNHQGITFLA EQVSHHPPMG VAHCENEHFT YDITSKLKTK
201: FLGNSVEIYP VGRTRVTLKK SGVVLDLVPP LTKVNNLIFG RTWVDSPGEM VMTNLTTGDK VVLYFQPCGW FGAGRYEVDG YVYSAAEEPK IMITGKWNKS
301: LSCQPCDQEG DPLPGTELKE IWRVAPAPQG DKYQYTHFAH KINSFDTAPK KLLASDSRLR PDRYALEKGD MSKSGAEKSR LEEQQRAEKR TREAKGEQFT
401: PRWFNLTDVV SPTPWGDLEI YEYNGKYTEH RAAIDRSDVT DETDVTSVKF SPWQYGSSSS Q

Best Arabidopsis Sequence Match ( AT5G59420.1 )
(BLAST)

001: MGSPKKNENK GFFAAMTSGF SMFGTAVSRS VNGVQGNEGV EVINPEGGKE DAEEEAQKGR WKDEERDSYW KMMQKYIGSD ITSMVTLPVV IFEPMTMLQK
101: MAEIMEYSHL LDQADECEDP YLRLVYASSW AISVYYAFQR TWKPFNPILG ETYEMVNHGG ISFISEQVSH HPPMSAGHAE NEHFIYDITS KLKTKLLGNS
201: VDVYPVGRTR VTLKKDGVVL DLVPPLTKIH NLIFGRTWVD SPGEMVMTNL TTGDKVVLYF QPCGWFGSGR YEVDGYVYSA AEEPKIMMTG KWNEKMSYQP
301: CDAEGEPLPG TELKEVWHLA DVPKNDNFQY THFAHKINSF DTAPAKLLAS DSRIRPDRYS LEQGDLSKAG SEKHSLEERQ RAEKRTRETK GQKFTPRWFD
401: LTDEITPTPW GDIEVYQYNG KYNEHRDTAE SSSSASNETD LKSIEFNPWQ YGNISTE

Arabidopsis Description

ORP3COxysterol-binding protein-related protein 3C [Source:UniProtKB/Swiss-Prot;Acc:Q93Y40]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.