CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028606_P002	Maize	cytosol	89.45	95.66
Os03t0274000-01	Rice	plasma membrane	83.16	88.55
TraesCS4D01G208700.1	Wheat	golgi	81.14	86.39
TraesCS4B01G207800.1	Wheat	cytosol	80.93	86.18
TraesCS4A01G096600.1	Wheat	cytosol	80.73	85.96
HORVU4Hr1G059840.1	Barley	cytosol	80.73	85.78
GSMUA_Achr9P03900_001	Banana	cytosol	75.86	81.84
GSMUA_Achr1P17320_001	Banana	cytosol	74.44	79.61
KRH10248	Soybean	endoplasmic reticulum	71.81	77.63
KRH29789	Soybean	endoplasmic reticulum	70.39	77.11
VIT_06s0004g04930.t01	Wine grape	cytosol	71.2	76.97
KRH24783	Soybean	plastid	69.78	76.44
Bra002568.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	70.79	76.37
CDX80271	Canola	cytosol	70.79	76.2
CDY33036	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	70.59	76.15
VIT_08s0007g00480.t01	Wine grape	cytosol	68.56	75.78
KRG99957	Soybean	cytosol, plastid	70.39	75.11
KRH49107	Soybean	endoplasmic reticulum	70.59	75.0
AT5G59420.1	Thale cress	cytosol, plastid	69.37	74.84
Solyc10g084800.1.1	Tomato	extracellular, plastid	67.34	72.49
KRG93817	Soybean	cytosol	13.18	72.22
Zm00001d006081_P001	Maize	cytosol	23.12	67.46
PGSC0003DMT400028593	Potato	cytosol, plastid	66.94	65.61
Zm00001d012754_P001	Maize	cytosol	39.96	62.54
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.76	17.42
EER91955	Sorghum	cytosol, extracellular, nucleus	26.57	17.37
KXG23396	Sorghum	cytosol	25.96	17.34
OQU91126	Sorghum	plastid	27.38	16.83
EES13369	Sorghum	cytosol	25.36	16.8

Protein Annotations

EnsemblPlants:OQU92826	EnsemblPlantsGene:SORBI_3001G421700	EntrezGene:8081508	Gene3D:1.20.120.1290	Gene3D:2.40.160.120	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	InterPro:OSBP_sf	InterPro:Oxysterol-bd
PANTHER:PTHR10972	PANTHER:PTHR10972:SF136	PFAM:PF01237	ProteinID:OQU92826	ProteinID:OQU92826.1	SEG:seg
SUPFAM:SSF144000	unigene:Sbi.15173	UniParc:UPI000B8BA0CF	UniProt:A0A1Z5SAJ5	MapMan:5.8.1.1	:

Description

hypothetical protein

Coordinates

chr1:-:70253441..70258224

Molecular Weight (calculated)

55591.9 Da

IEP (calculated)

5.070

GRAVY (calculated)

-0.385

Length

493 amino acids

Sequence
(BLAST)

001: MGSKDQGGGA ASSGGGFFSS FAAGMRSWGT AVHKSVNGLL GYEGLEVINP DGGTDDAEEE ALRGRWKQED RDSYWKMMHK YIGSDVTSLV TLPVIIFEPM
101: TMLQKMAELM EYCELLDKAD ECEDPYMRMV YASTWAVSVY FAYQRTWKPF NPILGETYEM VNHQGITFLA EQVSHHPPMG VAHCENEHFT YDITSKLRTK
201: FLGNSVEIYP VGRTRVTLKK SGVVLDLVPP LTKVNNLIFG RTWVDTPGEM VMTNLTTGDK VVLYFQPCGW FGAGRYEVDG YVYSAAEEPK IMITGKWNKS
301: LSYQPCDQEG DPLPGTELKE IWRVAPAPQG DKYQYTHFAH KINSFDTAPK KLLASDSRLR PDRYALEKGD MSKSGAEKSR LEEQQRAEKR TRDAKGEQFT
401: PRWFNMTDVV APTPWGDLEI YEYNGKYTEY RAAIDSSSVT GETDVTSTEF NPWQYGLALL VCCAISGFRA LVVSMTFPFP FNATIIQEVV YFM

Best Arabidopsis Sequence Match ( AT5G59420.1 )
(BLAST)

001: MGSPKKNENK GFFAAMTSGF SMFGTAVSRS VNGVQGNEGV EVINPEGGKE DAEEEAQKGR WKDEERDSYW KMMQKYIGSD ITSMVTLPVV IFEPMTMLQK
101: MAEIMEYSHL LDQADECEDP YLRLVYASSW AISVYYAFQR TWKPFNPILG ETYEMVNHGG ISFISEQVSH HPPMSAGHAE NEHFIYDITS KLKTKLLGNS
201: VDVYPVGRTR VTLKKDGVVL DLVPPLTKIH NLIFGRTWVD SPGEMVMTNL TTGDKVVLYF QPCGWFGSGR YEVDGYVYSA AEEPKIMMTG KWNEKMSYQP
301: CDAEGEPLPG TELKEVWHLA DVPKNDNFQY THFAHKINSF DTAPAKLLAS DSRIRPDRYS LEQGDLSKAG SEKHSLEERQ RAEKRTRETK GQKFTPRWFD
401: LTDEITPTPW GDIEVYQYNG KYNEHRDTAE SSSSASNETD LKSIEFNPWQ YGNISTE

Arabidopsis Description

ORP3COxysterol-binding protein-related protein 3C [Source:UniProtKB/Swiss-Prot;Acc:Q93Y40]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.