CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

nucleus 2
extracellular 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	93.24	95.65
Os10t0554100-01	Rice	cytosol	43.24	89.81
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	85.28	85.05
HORVU1Hr1G053930.1	Barley	cytosol	77.98	79.67
TraesCS1B01G224800.1	Wheat	cytosol	78.38	79.65
TraesCS1A01G210800.1	Wheat	cytosol	77.85	79.43
TraesCS1D01G214100.1	Wheat	cytosol	78.12	79.38
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.3	70.64
GSMUA_Achr5P20840_001	Banana	cytosol	45.89	67.45
Solyc08g078960.2.1	Tomato	cytosol	44.96	65.57
GSMUA_Achr11P...	Banana	cytosol	59.42	65.5
GSMUA_Achr11P...	Banana	cytosol	59.55	62.97
VIT_02s0154g00250.t01	Wine grape	mitochondrion	39.52	60.2
PGSC0003DMT400012089	Potato	cytosol	57.69	59.83
AT4G22540.5	Thale cress	cytosol	55.3	57.84
EES13369	Sorghum	cytosol	57.03	57.8
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	55.3	57.6
CDX76366	Canola	cytosol	54.77	57.28
Bra000774.1-P	Field mustard	nucleus	52.65	57.2
CDY21272	Canola	nucleus	52.65	57.2
AT4G12460.7	Thale cress	cytosol	52.12	56.63
CDX79161	Canola	cytosol	54.38	56.4
Bra013624.1-P	Field mustard	cytosol	54.38	56.4
CDX82950	Canola	cytosol	54.11	56.12
KRH77382	Soybean	cytosol	57.16	55.97
Bra020844.1-P	Field mustard	plastid	53.45	55.74
KRH28046	Soybean	cytosol	56.23	55.35
KRH04091	Soybean	cytosol	56.23	55.21
KRH57364	Soybean	cytosol	55.7	54.55
CDY42177	Canola	cytosol	54.64	54.07
KXG23396	Sorghum	cytosol	49.34	50.41
OQU91126	Sorghum	plastid	52.92	49.75
CDX90832	Canola	nucleus	52.79	46.88
OQU92826	Sorghum	cytosol	17.37	26.57

Protein Annotations

Gene3D:2.40.160.120	MapMan:35.1	UniProt:C5WSH6	ncoils:Coil	EnsemblPlants:EER91955	ProteinID:EER91955
ProteinID:EER91955.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0008150	GO:GO:0008152
GO:GO:0055114	InterPro:IPR001849	InterPro:OSBP_sf	InterPro:Oxysterol-bd	PFAM:PF01237	PFAM:PF15413
InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR10972	PANTHER:PTHR10972:SF101	SMART:SM00233	EnsemblPlantsGene:SORBI_3001G302900
SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI00081ABE29	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:58614691..58621627

Molecular Weight (calculated)

84114.6 Da

IEP (calculated)

6.904

GRAVY (calculated)

-0.640

Length

754 amino acids

Sequence
(BLAST)

001: MRAWEMHPLC CLAGEWPSSG GGGGGLAPGD RSLPPAEEDA DAAGEAPAVA GVLYKWTNIG KGWRPRWFAI RGGVLAYSKI RRRVAAEPHP ASEAAAGGGG
101: GVRLIGVARG GAGGGAGERP IGFVPLKISS FSESKSDDKR FYIITPTKTL QLRTGCAKDR ATWIEALVSA RSEYSFNGDL SGDQNDASFS TEKLRNRLHA
201: EGIGEAVIKD CEQIIHSEFS QYQTQMKQRC EEYLSFIGSL PREVEVVNSV DSTVPEKPQL ELFKHDCSSS GKCSEYSNTE SSDDVGKQEI SELSDGDEFH
301: FYDTRQSFSE FATSPADPRK GCLNNGNEDH KSVEPLSAHK AEKCMLSHSK RRSQLPEPIE KEKGVSLWSM IKDNVGKDLT RVCLPVYFNE PLSSLQKCFE
401: ELEYSYLLDR AYECGLRGNG LMRILYVAAF AVSGYASTDS RPCKPFNPLL GETYEADYPE KGIRFFSEKV SHHPMVVACH CEGKGWKFWG DSNLKSKFWG
501: QSIQLDPNGV LTLEFDDGET FQWSKVTTTI NNLILGRVYC HHHGTMNISG NRRYSCKLTF KEQSFLDRNP RQVQGVVKDA DGSKVATLMG KWDESVHCII
601: NNDASKANSH GSHQSSGATL LWEKNEPPVN PTRYNLSAFA ITLNELTPEL KEKLPPTDSR LRPDQRHLEN GEYEKANAEK LRLETRQRMA RKMQESGWKP
701: RWFQRDREDG TYRYVGGYWE AREQRTWVGC NDIFGNLSSS QKLPPSALYT SSSI

Best Arabidopsis Sequence Match ( AT4G22540.1 )
(BLAST)

001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A

Arabidopsis Description

ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.