Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76366 | Canola | cytosol | 88.58 | 93.62 |
| CDX79161 | Canola | cytosol | 85.04 | 89.13 |
| CDX82950 | Canola | cytosol | 84.78 | 88.86 |
| AT4G22540.5 | Thale cress | cytosol | 83.46 | 88.21 |
| CDY21272 | Canola | nucleus | 72.05 | 79.11 |
| Solyc08g078960.2.1 | Tomato | cytosol | 48.95 | 72.15 |
| Os10t0554100-01 | Rice | cytosol | 33.33 | 69.97 |
| PGSC0003DMT400012089 | Potato | cytosol | 64.17 | 67.26 |
| KRH77382 | Soybean | cytosol | 67.19 | 66.49 |
| KRH04091 | Soybean | cytosol | 66.67 | 66.15 |
| KRH57364 | Soybean | cytosol | 66.8 | 66.1 |
| VIT_02s0154g00240.t01 | Wine grape | cytosol, nucleus | 62.73 | 66.02 |
| KRH28046 | Soybean | cytosol | 66.14 | 65.8 |
| VIT_02s0154g00250.t01 | Wine grape | mitochondrion | 42.39 | 65.25 |
| GSMUA_Achr5P20840_001 | Banana | cytosol | 43.83 | 65.11 |
| CDX90832 | Canola | nucleus | 71.26 | 63.96 |
| GSMUA_Achr11P... | Banana | cytosol | 55.12 | 61.4 |
| CDX75168 | Canola | endoplasmic reticulum | 39.76 | 60.72 |
| GSMUA_Achr6P36780_001 | Banana | cytosol | 53.54 | 59.13 |
| CDY59861 | Canola | endoplasmic reticulum | 38.58 | 58.92 |
| GSMUA_Achr11P... | Banana | cytosol | 54.99 | 58.77 |
| Os08t0154900-00 | Rice | cytosol | 53.81 | 56.32 |
| HORVU4Hr1G088060.4 | Barley | mitochondrion | 46.85 | 55.61 |
| HORVU7Hr1G071680.28 | Barley | cytosol | 54.07 | 55.45 |
| TraesCS4B01G375900.1 | Wheat | cytosol | 52.36 | 55.42 |
| Zm00001d029872_P002 | Maize | cytosol, extracellular, nucleus | 53.41 | 55.37 |
| TraesCS7B01G202100.1 | Wheat | cytosol | 53.67 | 55.2 |
| TraesCS7D01G297200.3 | Wheat | cytosol | 53.54 | 55.14 |
| TraesCS1A01G210800.1 | Wheat | cytosol | 53.41 | 55.07 |
| HORVU1Hr1G053930.1 | Barley | cytosol | 53.28 | 55.01 |
| TraesCS1D01G214100.1 | Wheat | cytosol | 53.41 | 54.85 |
| EER91955 | Sorghum | cytosol, extracellular, nucleus | 54.07 | 54.64 |
| TraesCS1B01G224800.1 | Wheat | cytosol | 53.15 | 54.58 |
| TraesCS7A01G302000.3 | Wheat | cytosol | 53.54 | 54.4 |
| TraesCS5A01G537000.1 | Wheat | cytosol, nucleus, plasma membrane | 52.1 | 54.31 |
| KXG40415 | Sorghum | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 51.57 | 53.91 |
| EES13369 | Sorghum | cytosol | 52.49 | 53.76 |
| Zm00001d048544_P003 | Maize | cytosol | 51.18 | 52.21 |
| TraesCS4D01G361400.2 | Wheat | cytosol, nucleus, plasma membrane | 49.74 | 51.42 |
| Zm00001d047105_P007 | Maize | cytosol, extracellular, nucleus | 50.79 | 51.19 |
| CDY34011 | Canola | nucleus, plastid | 52.23 | 50.77 |
| CDX83144 | Canola | nucleus, plastid | 52.23 | 50.77 |
| Zm00001d049556_P002 | Maize | cytosol | 48.43 | 50.14 |
| CDX98007 | Canola | cytosol | 49.48 | 48.65 |
| CDY19393 | Canola | cytosol | 49.48 | 48.46 |
| CDY51776 | Canola | golgi | 9.97 | 40.86 |
| CDX75169 | Canola | plastid | 29.0 | 38.64 |
| CDY64064 | Canola | plastid | 10.5 | 31.01 |
| CDY14648 | Canola | plastid | 10.5 | 31.01 |
| CDY44693 | Canola | cytosol, plastid | 17.45 | 29.3 |
| CDY41621 | Canola | cytosol, plastid | 17.32 | 29.14 |
| CDY07917 | Canola | cytosol | 16.93 | 29.05 |
| CDY33036 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 17.19 | 28.67 |
| CDX73970 | Canola | cytosol | 16.67 | 28.6 |
| CDX80271 | Canola | cytosol | 17.06 | 28.38 |
| CDY10468 | Canola | cytosol | 16.67 | 28.04 |
| CDY40331 | Canola | cytosol, plastid | 16.4 | 27.59 |
| CDY22188 | Canola | nucleus | 6.17 | 26.7 |
Protein Annotations
| Gene3D:2.40.160.120 | MapMan:35.1 | GO:A0A078HWI2 | UniProt:A0A078HWI2 | EnsemblPlants:CDY42177 | ProteinID:CDY42177 |
| ProteinID:CDY42177.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00074370001 |
| InterPro:IPR001849 | InterPro:OSBP_sf | InterPro:Oxysterol-bd | PFAM:PF01237 | PFAM:PF15413 | InterPro:PH_domain |
| PFscan:PS50003 | PANTHER:PTHR10972 | PANTHER:PTHR10972:SF88 | SMART:SM00233 | SUPFAM:SSF144000 | SUPFAM:SSF50729 |
| TMHMM:TMhelix | UniParc:UPI0004EE77A7 | : | : | : | : |
Description
BnaC03g64980DBnaC03g64980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWI2]
Coordinates
chrLK032517:-:6613..13560
Molecular Weight (calculated)
87457.9 Da
IEP (calculated)
7.014
GRAVY (calculated)
-0.615
Length
762 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVKELHPLC CITLESPHGI DDNNRPPVEP VTNLTRSRSL PATKVTSVGS ESVAGILHKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSSSDDVR
101: LIGNISADRL SRMDNCFKFS RVFVYSAIYI FGLFFCLIFK INYIMNQDRN FGWGLANYNN TCFDMLQISS FRESKSEDRK FYIFTATKTL HLRTDSISDR
201: AAWLQALAST KCIFPLRSLN GDFSFTSPKD LSITTERLKK RLHEEGINDN LVKECEQIML SEFSEMHEQI KLLHEERTNL FDALRQLETA NLEAETSGND
301: DNGYQLTKHG FSSLGRGKYS ECSTTASSDD KQEFEYVSEE DEPSFHDTKG YFNEPNVGSG SNGYTDIKRR TKLPNPAEKE KGVSLWSMIK DNVGKDLTRV
401: CLPVYFNEPT SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE
501: GKGWKFWGDT NLKSKFWGRS IQVEPVGVLT LEFDDGEVFQ WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGYVEDVSA
601: KKAATVFGKW DDSLYYVAGE GVSKTKVSDP ASNASLLWRR TKPPPNVTRY NLTSFAITMN ELTPGLEEML PPTDSRLRPD QRHLENGEYE KANLEKQRLE
701: RRQRMSRQLQ ESGWRPRWFD KQVESETFKY TGVYWEARGH RTWDDCPDIF GEFTEEQLAD SA
101: LIGNISADRL SRMDNCFKFS RVFVYSAIYI FGLFFCLIFK INYIMNQDRN FGWGLANYNN TCFDMLQISS FRESKSEDRK FYIFTATKTL HLRTDSISDR
201: AAWLQALAST KCIFPLRSLN GDFSFTSPKD LSITTERLKK RLHEEGINDN LVKECEQIML SEFSEMHEQI KLLHEERTNL FDALRQLETA NLEAETSGND
301: DNGYQLTKHG FSSLGRGKYS ECSTTASSDD KQEFEYVSEE DEPSFHDTKG YFNEPNVGSG SNGYTDIKRR TKLPNPAEKE KGVSLWSMIK DNVGKDLTRV
401: CLPVYFNEPT SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE
501: GKGWKFWGDT NLKSKFWGRS IQVEPVGVLT LEFDDGEVFQ WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGYVEDVSA
601: KKAATVFGKW DDSLYYVAGE GVSKTKVSDP ASNASLLWRR TKPPPNVTRY NLTSFAITMN ELTPGLEEML PPTDSRLRPD QRHLENGEYE KANLEKQRLE
701: RRQRMSRQLQ ESGWRPRWFD KQVESETFKY TGVYWEARGH RTWDDCPDIF GEFTEEQLAD SA
001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A
Arabidopsis Description
ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.