Factsheet for Zm00001d049556_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13369	Sorghum	cytosol	86.14	85.22
TraesCS7B01G202100.1	Wheat	cytosol	75.54	75.03
Os08t0154900-00	Rice	cytosol	74.05	74.86
TraesCS7D01G297200.3	Wheat	cytosol	75.14	74.73
HORVU7Hr1G071680.28	Barley	cytosol	75.41	74.7
TraesCS7A01G302000.3	Wheat	cytosol	74.86	73.47
GSMUA_Achr11P...	Banana	cytosol	54.89	59.06
GSMUA_Achr5P20840_001	Banana	cytosol	40.9	58.67
Solyc08g078960.2.1	Tomato	cytosol	40.49	57.64
GSMUA_Achr11P...	Banana	cytosol	55.03	56.8
VIT_02s0154g00250.t01	Wine grape	mitochondrion	37.23	55.35
PGSC0003DMT400012089	Potato	cytosol	53.12	53.78
Bra000774.1-P	Field mustard	nucleus	50.14	53.17
CDY21272	Canola	nucleus	49.86	52.88
AT4G22540.5	Thale cress	cytosol	51.77	52.84
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	52.58	52.65
AT4G12460.7	Thale cress	cytosol	49.59	52.59
CDX76366	Canola	cytosol	51.22	52.29
Bra013624.1-P	Field mustard	cytosol	51.63	52.27
CDX82950	Canola	cytosol	51.49	52.13
CDX79161	Canola	cytosol	51.49	52.13
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	50.68	51.52
Bra020844.1-P	Field mustard	plastid	50.54	51.45
KRH77382	Soybean	cytosol	52.17	49.87
KRH57364	Soybean	cytosol	51.9	49.61
KRH04091	Soybean	cytosol	51.77	49.61
KRH28046	Soybean	cytosol	51.49	49.48
Zm00001d048544_P003	Maize	cytosol	49.86	49.13
CDY42177	Canola	cytosol	50.14	48.43
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	49.73	48.41
Zm00001d030609_P002	Maize	cytosol	44.43	44.01
CDX90832	Canola	nucleus	50.14	43.46
Zm00001d033669_P003	Maize	plastid	47.01	42.2
Zm00001d013470_P007	Maize	plastid	46.47	41.86
Zm00001d028606_P002	Maize	cytosol	14.54	23.21
Zm00001d047812_P001	Maize	extracellular	14.27	22.53
Zm00001d034225_P002	Maize	endoplasmic reticulum, extracellular	9.38	19.38
Zm00001d037837_P002	Maize	endoplasmic reticulum, extracellular	8.02	19.16
Zm00001d006081_P001	Maize	cytosol	4.35	18.93
Zm00001d012754_P001	Maize	cytosol	7.61	17.78
Zm00001d052202_P001	Maize	cytosol	8.7	15.88
Zm00001d040358_P001	Maize	cytosol	9.24	13.33

Protein Annotations

EntrezGene:100383333	Gene3D:2.30.29.30	Gene3D:2.40.160.120	MapMan:35.1	UniProt:A0A1D6PW19	ProteinID:AQK50775.1
InterPro:IPR001849	InterPro:IPR011993	InterPro:OSBP_sf	InterPro:Oxysterol-bd	PFAM:PF01237	PFAM:PF15413
InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR10972	PANTHER:PTHR10972:SF88	SMART:SM00233
SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI0008458FA3	EnsemblPlantsGene:Zm00001d049556	EnsemblPlants:Zm00001d049556_P002	EnsemblPlants:Zm00001d049556_T002
SEG:seg	:	:	:	:	:

Description

Putative oxysterol binding domain family protein

Coordinates

chr4:-:34938832..34945313

Molecular Weight (calculated)

83307.6 Da

IEP (calculated)

6.810

GRAVY (calculated)

-0.559

Length

736 amino acids

Sequence
(BLAST)

001: MRGGGSGRGH GNDQYSHNHH HSSLCCLSAA PPLAGDATPT LTPEPEAAAA SIASTVSTVV VEGVLHKWTN YGRGWRERWF SLRDGVLSYS KIRANAGAKT
101: GAGATDGDGE VRVIGSRVEG ARRTEKPAGV VFLKVSAFRE SKSDDRRFYI FSPTKTLHLK TNSKVDRVAW IEALILARSV YSLGSLSGRA TFVQSDVSIS
201: TARLRDRMHQ EGLNESLIQD CEQIVLSEFS SYRKQLKCRY EDYLSLFGSC RHNFEEGKDG SITQGTLTRN DFSSSRHGNF SEYSTTESDE HEFEKHDGGE
301: LICEDESAFF DSIDYFTESD NRSSTMLSGK EVVDSQTHDS SNNIQAQIRR RSRLPDPIEK EKGISLWSII KDSVGKDLTR VCLPVYFNEP LSSLQKCFED
401: LEYSYLLDQA YQHGKVYTLL VSMAVYSSLE NERCFQSIIV VSVSFVQVSH HPMLIACHCE GKGWKFWGDS NLKSKFWGQS IQVEPVGILT LEFEDGEIFQ
501: WNKVTTTIHN LILGKLYCSH HGTMHIKGNR QYSCKLKFKE PSLLDRNPHL LYVCLFHARH YVYLLPALGP QVQGFVEDNN GNKASFLIGM WDESIYCSNS
601: DTSKVKSADQ LKGASLLWEK NKPAPNPTRY NLSSFAITLN ELTPGLQEKL PPTDSRLRPD QRHLENGEYE KANAEKLRLE RRQRMSTKLQ DNGWKSRWFE
701: QDTEDGTYCY KGGYWETRER GFWDGCLDIF GEFVET

Best Arabidopsis Sequence Match ( AT4G12460.1 )
(BLAST)

001: MPLTRSKSLP ATENGGSDRE TLQSGRSVAG ILYKWTNYGK GWRSRWFLLR DGILSYSKIR RPENVNLLSP SDDLRLIGDI STDRLLRMKS CSGRSRRKHH
101: KNIGIVHLKV SSYRESKSDH RKFYIFTATK TLHLRTDSRS DRAAWLQALA STRGIVPLQS INGDFSFVSP KDLSISTERL KKRLFEEGMN ESLVKECEQI
201: VDSEFCEVQE QIKLLHEERK KLLDALRQLE MANLEAEASG IHDDVYQLRN HKYSSLGRGK YSECSTSASS DDKQEFEDIS EEDEASFHDT KESFGEPDVG
301: SVLTHFKRRT KLPDPAEKER GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDQAYE YGKSGKSLLR ALNVAAFAVS GYASTEGRHC
401: KPFNPLLGET YEADFPEKGI RFFSEKVSHH PTVIACHCEG KGWKFWGDTN LRSKFWGRSI QLEPVGILTL EFDDGEIFQW SKVTTTIYNI LLGKLYCDHH
501: GIMKIRGNRQ YSCMLKFKEQ SILDRNPHQV NGFVEDVTGK KAATVFGKWN DSLYYVAGDG INKASASLLW KATKAPPNVT RYNFTSFAMT LNELIPGLEE
601: KLPPTDSRLR PDQRHLENGE YEKANEEKQR LERRQRMSRQ IQESGWRPRW FEPQGESESY KYTGGYWEAR DVKSWDDCPN IFGEFTEEVA DCA

Arabidopsis Description

ORP2BOSBP(oxysterol binding protein)-related protein 2B [Source:TAIR;Acc:AT4G12460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.