Factsheet for VIT_02s0154g00240.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0154g00250.t01	Wine grape	mitochondrion	53.45	78.18
Solyc08g078960.2.1	Tomato	cytosol	51.93	72.73
PGSC0003DMT400012089	Potato	cytosol	72.51	72.21
KRH77382	Soybean	cytosol	75.55	71.04
KRH28046	Soybean	cytosol	73.76	69.71
AT4G22540.5	Thale cress	cytosol	69.34	69.63
KRH04091	Soybean	cytosol	73.48	69.27
AT4G12460.7	Thale cress	cytosol	65.61	68.44
KRH57364	Soybean	cytosol	72.79	68.44
CDX76366	Canola	cytosol	67.68	67.96
Bra013624.1-P	Field mustard	cytosol	68.09	67.81
CDX79161	Canola	cytosol	68.09	67.81
CDX82950	Canola	cytosol	67.4	67.13
CDY21272	Canola	nucleus	63.81	66.57
Bra000774.1-P	Field mustard	nucleus	63.67	66.43
Os10t0554100-01	Rice	cytosol	33.29	66.39
Bra020844.1-P	Field mustard	plastid	66.02	66.11
GSMUA_Achr5P20840_001	Banana	cytosol	45.86	64.72
CDY42177	Canola	cytosol	66.02	62.73
GSMUA_Achr11P...	Banana	cytosol	58.7	62.13
GSMUA_Achr6P36780_001	Banana	cytosol	58.01	60.87
GSMUA_Achr11P...	Banana	cytosol	58.98	59.89
TraesCS4B01G375900.1	Wheat	cytosol	57.18	57.5
TraesCS7B01G202100.1	Wheat	cytosol	58.7	57.35
TraesCS7D01G297200.3	Wheat	cytosol	58.56	57.3
Os08t0154900-00	Rice	cytosol	57.46	57.14
HORVU4Hr1G088060.4	Barley	mitochondrion	50.55	57.01
HORVU7Hr1G071680.28	Barley	cytosol	58.43	56.93
HORVU1Hr1G053930.1	Barley	cytosol	57.87	56.78
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	56.77	56.22
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	57.04	56.19
TraesCS7A01G302000.3	Wheat	cytosol	58.15	56.13
TraesCS1B01G224800.1	Wheat	cytosol	57.32	55.93
TraesCS1A01G210800.1	Wheat	cytosol	57.04	55.89
TraesCS1D01G214100.1	Wheat	cytosol	57.04	55.66
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.94	55.56
EER91955	Sorghum	cytosol, extracellular, nucleus	57.6	55.3
EES13369	Sorghum	cytosol	56.35	54.84
CDX90832	Canola	nucleus	63.67	54.3
Zm00001d048544_P003	Maize	cytosol	54.28	52.61
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	53.31	52.37
VIT_18s0001g03790.t01	Wine grape	cytosol	54.97	51.62
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	53.59	51.32
Zm00001d049556_P002	Maize	cytosol	51.52	50.68
VIT_01s0137g00290.t01	Wine grape	cytosol	54.83	49.87
VIT_07s0031g02980.t01	Wine grape	plastid	51.38	48.5
VIT_08s0007g00480.t01	Wine grape	cytosol	17.4	28.25
VIT_06s0004g04930.t01	Wine grape	cytosol	17.4	27.63

Protein Annotations

ArrayExpress:VIT_02s0154g00240	EnsemblPlants:VIT_02s0154g00240.t01	EnsemblPlantsGene:VIT_02s0154g00240	Gene3D:2.40.160.120	InterPro:IPR001849	InterPro:OSBP_sf
InterPro:Oxysterol-bd	InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR10972	PANTHER:PTHR10972:SF88	PFAM:PF01237
PFAM:PF15413	PFscan:PS50003	ProteinID:CBI31899.3	SEG:seg	SMART:SM00233	SUPFAM:SSF144000
SUPFAM:SSF50729	UniParc:UPI0001BE3AC5	UniProt:D7TN26	MapMan:35.1	:	:

Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D7TN26]

Coordinates

chr2:+:5062791..5074217

Molecular Weight (calculated)

78706.4 Da

IEP (calculated)

6.360

GRAVY (calculated)

-0.657

Length

724 amino acids

Sequence
(BLAST)

001: MRVKEMHPLC CISLESPGIG DQSPEVSRAA TAASSGGSDG NAGRPAGSDT SVAGVLYKWT NYGKGWRSRW FLLRNGVLSY SKIRRPESLH LPSPADDIRV
101: IGDVSTSRLS RLDSGGGRRK HQKNVGIVHL KISSFRESKS DDRRFYIFTA TKTLHLRTES KRDRVAWIEA LVSTRSLFSF RPLNDNLSLV PNDISVSTER
201: LKNRLLEEGA HEGLVRDCEQ IMLSEFSEIQ GQVKVLCEER SNLLDTLRQL EAANIEAEVS GINDSEFQLT KHELSSLGRG KYSECSTTES SDDIEKQELE
301: EVSDEEETSF FDTREDFAEP TIHTENRFCE SRYPQIERRK KLPDPVEKER GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDRAYE
401: YGKAGNSLLR VLHVAAFAVS GYASSEGRHC KPFNPLLGET YEADFPDKGI RFFSEKVSHH PTLIACHCEG KGWKFWADSN LRTKFWGRSI QLDPVGVLTL
501: EFDDGEVFKW SKVTTTIYNL ILGKVYCDHH GTMHIQGNRQ HSCKLKFKEQ ALLDRNPHQV HGFVEDLTGE RAATLFGKWD DSMXXXXXXX XXXXXXXXXX
601: XXXXXXXXXX XXXXXXXNEL TSGLQEKLPP TDSRLRPDQR HLENGEYEKA NAEKLRLEKR QRMSRKLQEN GWKPKWFERE GEDGPFRYMG GYWEARDQGK
701: WDGCPNIFGE FTEDLVNSYE GSGL

Best Arabidopsis Sequence Match ( AT4G22540.1 )
(BLAST)

001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A

Arabidopsis Description

ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.