Factsheet for VIT_08s0007g00480.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P03900_001	Banana	cytosol	80.72	78.77
GSMUA_Achr1P17320_001	Banana	cytosol	81.39	78.74
VIT_06s0004g04930.t01	Wine grape	cytosol	80.04	78.29
KRG99957	Soybean	cytosol, plastid	79.15	76.41
KRH49107	Soybean	endoplasmic reticulum	78.92	75.86
Os03t0274000-01	Rice	plasma membrane	76.91	74.08
Solyc10g084800.1.1	Tomato	extracellular, plastid	75.11	73.14
Zm00001d028606_P002	Maize	cytosol	75.11	72.67
Zm00001d047812_P001	Maize	extracellular	75.56	72.32
TraesCS4B01G207800.1	Wheat	cytosol	74.66	71.92
TraesCS4D01G208700.1	Wheat	golgi	74.66	71.92
TraesCS4A01G096600.1	Wheat	cytosol	74.66	71.92
HORVU4Hr1G059840.1	Barley	cytosol	73.77	70.91
OQU92826	Sorghum	cytosol	75.78	68.56
PGSC0003DMT400028593	Potato	cytosol, plastid	75.11	66.6
Zm00001d037837_P002	Maize	endoplasmic reticulum, extracellular	39.46	57.14
Zm00001d006081_P001	Maize	cytosol	20.63	54.44
Zm00001d034225_P002	Maize	endoplasmic reticulum, extracellular	41.93	52.53
Zm00001d012754_P001	Maize	cytosol	34.75	49.21
Zm00001d052202_P001	Maize	cytosol	41.03	45.41
Zm00001d040358_P001	Maize	cytosol	42.15	36.86
VIT_02s0154g00250.t01	Wine grape	mitochondrion	27.58	24.85
VIT_18s0001g03790.t01	Wine grape	cytosol	30.49	17.64
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	28.25	17.4
VIT_07s0031g02980.t01	Wine grape	plastid	28.7	16.69
VIT_01s0137g00290.t01	Wine grape	cytosol	28.7	16.08

Protein Annotations

Gene3D:1.20.120.1290	EntrezGene:100263081	wikigene:100263081	Gene3D:2.40.160.120	MapMan:5.8.1.1	ProteinID:CBI30544
ProteinID:CBI30544.3	UniProt:D7THM8	EMBL:FN595991	EntrezGene:LOC100263081	wikigene:LOC100263081	InterPro:OSBP_sf
InterPro:Oxysterol-bd	InterPro:Oxysterol-bd_CS	PFAM:PF01237	ScanProsite:PS01013	PANTHER:PTHR10972	PANTHER:PTHR10972:SF136
SUPFAM:SSF144000	TIGR:TC65005	UniParc:UPI0001983D55	ArrayExpress:VIT_08s0007g00480	EnsemblPlantsGene:VIT_08s0007g00480	EnsemblPlants:VIT_08s0007g00480.t01
unigene:Vvi.9237	RefSeq:XP_002267148	RefSeq:XP_002267148.2	RefSeq:XP_010654278.1	SEG:seg	:

Description

No Description!

Coordinates

chr8:+:14772497..14778990

Molecular Weight (calculated)

50770.6 Da

IEP (calculated)

4.829

GRAVY (calculated)

-0.569

Length

446 amino acids

Sequence
(BLAST)

001: MAPKDDKKQG GGFLASIVSS FANLGNVVNG LMGYEGLEVV NPEGGTEDAE AEAQRGRWRQ EDRDSYWKMM HKYIGSDVTS MVTLPVMIFE PLTILQRMAE
101: LMEYSHLLDL ADECEDPYLR LVYTSSWAIS MYYACQRTWK PFNPILGETY ELTNHGGIKF IAEQISHHPP ISAAHAENEH FAYDITSKLK TKFLGNSLDV
201: YPLGRTRVTL KRDGVVLDLV PPATKVNNLI FGRTWVDSPG EMIMTNLTTG DKVVLYFQPC GWFGAGRYEV DGYVYNAAEE PKILITGKWN ESMNYQPCDL
301: EGEPLPGSEQ KEVWKVADVP ENDKFQFTYF AHKINSFETA PRKLLASDSR LRPDRYALEK GDLSKSSSEK SRLEEKQRAE KRNREAQGHQ FTPRWFDITS
401: EISPTPWGDL EVCRYNGKYS EYRASVDSSD SIEEVDVSST EFNPWQ

Best Arabidopsis Sequence Match ( AT5G02100.1 )
(BLAST)

001: MASNDPKNGG GFFASLASSI TNFGSAMSKS VNGLMGYEGL EVINPEGSTD DAEEEAGRGR WKQEERDGYW KMMQKYIGSD VTSMVTLPVI IFEPMTMLQK
101: MAELMEYSYL LDMADKTEDP YMRMVYASSW AISVYYAYQR TWKPFNPILG ETYEMTNHNG INFIAEQVCH HPPMSAGHAE NEHFAYDCTS KLKTKFLGNS
201: IDVYPVGRTR VTLKRDGVVL DLVPPLTKVH NLIFGRTWVD SPGEMVMTNL TTGDKVVLYF QPCGWFGSGR YEVDGYVYNS AEEPKMLMTG KWNESLSYQP
301: CDAEGEPLPG TELKEVWKVA EAPKNDKYQY THFAHKINSF DTAPKKLLSS DSRLRPDRYA LEMGDMSKSG FEKSSLEDRQ RAEKKSREEK GQKFAPKWFD
401: ETEEVTPTPW GDLEVYQFNG KYSVHRATAE NSEDTTDVKL TQFNPWQFQD LSA

Arabidopsis Description

ORP3AOxysterol-binding protein-related protein 3A [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.