Factsheet for GSMUA_Achr1P17320_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P03900_001	Banana	cytosol	85.68	86.43
KRH10248	Soybean	endoplasmic reticulum	81.56	82.46
VIT_08s0007g00480.t01	Wine grape	cytosol	78.74	81.39
Zm00001d028606_P002	Maize	cytosol	80.48	80.48
VIT_06s0004g04930.t01	Wine grape	cytosol	79.18	80.04
KRH29789	Soybean	endoplasmic reticulum	78.09	80.0
KRH24783	Soybean	plastid	77.87	79.78
Os03t0274000-01	Rice	plasma membrane	79.83	79.48
KRH49107	Soybean	endoplasmic reticulum	79.83	79.31
KRG99957	Soybean	cytosol, plastid	79.39	79.22
Zm00001d047812_P001	Maize	extracellular	79.39	78.54
TraesCS4A01G096600.1	Wheat	cytosol	78.31	77.97
TraesCS4D01G208700.1	Wheat	golgi	78.09	77.75
TraesCS4B01G207800.1	Wheat	cytosol	78.09	77.75
Bra002568.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	76.57	77.24
CDY33036	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	76.57	77.24
CDX80271	Canola	cytosol	76.57	77.07
HORVU4Hr1G059840.1	Barley	cytosol	77.44	76.94
AT5G59420.1	Thale cress	cytosol, plastid	75.7	76.37
Solyc10g084800.1.1	Tomato	extracellular, plastid	75.49	75.98
KRG93817	Soybean	cytosol	14.53	74.44
OQU92826	Sorghum	cytosol	79.61	74.44
PGSC0003DMT400028593	Potato	cytosol, plastid	75.05	68.79
Zm00001d006081_P001	Maize	cytosol	22.34	60.95
Zm00001d037837_P002	Maize	endoplasmic reticulum, extracellular	39.91	59.74
Zm00001d034225_P002	Maize	endoplasmic reticulum, extracellular	43.17	55.9
Zm00001d012754_P001	Maize	cytosol	37.09	54.29
Zm00001d052202_P001	Maize	cytosol	42.08	48.14
Zm00001d040358_P001	Maize	cytosol	42.3	38.24
GSMUA_Achr5P20840_001	Banana	cytosol	26.68	23.98
GSMUA_Achr6P36780_001	Banana	cytosol	29.28	19.57
GSMUA_Achr11P...	Banana	cytosol	29.93	19.35
GSMUA_Achr11P...	Banana	cytosol	28.2	19.01
GSMUA_Achr9P02070_001	Banana	cytosol	28.63	17.55
GSMUA_Achr6P06750_001	Banana	cytosol	28.63	17.44
GSMUA_Achr2P07260_001	Banana	plastid	25.81	16.88
GSMUA_Achr10P...	Banana	plastid	29.5	16.73
GSMUA_Achr3P21140_001	Banana	nucleus	29.72	9.69

Protein Annotations

EnsemblPlants:GSMUA_Achr1P17320_001	EnsemblPlants:GSMUA_Achr1T17320_001	EnsemblPlantsGene:GSMUA_Achr1G17320_001	Gene3D:1.20.120.1290	Gene3D:2.40.160.120	InterPro:OSBP_sf
InterPro:Oxysterol-bd	InterPro:Oxysterol-bd_CS	PANTHER:PTHR10972	PANTHER:PTHR10972:SF136	PFAM:PF01237	ScanProsite:PS01013
SEG:seg	SUPFAM:SSF144000	UniParc:UPI000295D281	UniProt:M0S0P0	MapMan:5.8.1.1	:

Description

Putative Oxysterol-binding protein 8 [Source:GMGC_GENE;Acc:GSMUA_Achr1G17320_001]

Coordinates

chr1:+:12906954..12916888

Molecular Weight (calculated)

52121.2 Da

IEP (calculated)

4.744

GRAVY (calculated)

-0.559

Length

461 amino acids

Sequence
(BLAST)

001: MDSGDQKPAS SAAGGGFFSA IASSVRNWGS AMQKSVNGLL GYEGLEVINP EGGTDDAEAE AQRGRWKQED RDGYWKMMHK YIGSDVTSMV TLPVIIFEPM
101: TMLQKMAELM EYSYLLDMAD DCEDPYMRLV YTSSWAISVY YAYQRTWKPF NPILGETYEM ANHGGITFIA EQVSHHPPMS AAHAENEHFI YDITSKLKTK
201: FLGNSVEVYP VGRTRVTLKK SGVVVDLVPP PTKVNNLIFG RTWVDSPGEM IMTNLTTGDK VVLYFQPCGW FGAGRYEVDG YVYDAAEEPK ILITGKWNES
301: MSCQPCDKEG EPLSGTELKE VWRVAATPVN DKYQYTYFAH KINSFETAPK NLLASDSRLR PDRYALEKGD MSKSGAEKGS LEEKQREEKR TREANGHKFT
401: PRWFNLSSEI TPTPWGDLEI YEFNGKYAEH RAKVDDSDSI EEVDIKTIEF NPWQYSDLSA E

Best Arabidopsis Sequence Match ( AT5G02100.1 )
(BLAST)

001: MASNDPKNGG GFFASLASSI TNFGSAMSKS VNGLMGYEGL EVINPEGSTD DAEEEAGRGR WKQEERDGYW KMMQKYIGSD VTSMVTLPVI IFEPMTMLQK
101: MAELMEYSYL LDMADKTEDP YMRMVYASSW AISVYYAYQR TWKPFNPILG ETYEMTNHNG INFIAEQVCH HPPMSAGHAE NEHFAYDCTS KLKTKFLGNS
201: IDVYPVGRTR VTLKRDGVVL DLVPPLTKVH NLIFGRTWVD SPGEMVMTNL TTGDKVVLYF QPCGWFGSGR YEVDGYVYNS AEEPKMLMTG KWNESLSYQP
301: CDAEGEPLPG TELKEVWKVA EAPKNDKYQY THFAHKINSF DTAPKKLLSS DSRLRPDRYA LEMGDMSKSG FEKSSLEDRQ RAEKKSREEK GQKFAPKWFD
401: ETEEVTPTPW GDLEVYQFNG KYSVHRATAE NSEDTTDVKL TQFNPWQFQD LSA

Arabidopsis Description

ORP3AOxysterol-binding protein-related protein 3A [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.