Factsheet for Bra002568.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33036	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	98.91	98.91
CDX80271	Canola	cytosol	97.59	97.38
AT5G59420.1	Thale cress	cytosol, plastid	92.56	92.56
KRH10248	Soybean	endoplasmic reticulum	86.87	87.06
VIT_06s0004g04930.t01	Wine grape	cytosol	85.56	85.75
KRH24783	Soybean	plastid	84.03	85.33
KRH29789	Soybean	endoplasmic reticulum	83.37	84.67
Bra029757.1-P	Field mustard	cytosol, plastid	78.99	79.52
Bra001317.1-P	Field mustard	cytosol	76.81	79.05
GSMUA_Achr9P03900_001	Banana	cytosol	78.56	78.56
KRG93817	Soybean	cytosol	15.32	77.78
Bra034064.1-P	Field mustard	cytosol, plastid	74.18	77.22
GSMUA_Achr1P17320_001	Banana	cytosol	77.24	76.57
Zm00001d028606_P002	Maize	cytosol	76.15	75.49
Os03t0274000-01	Rice	plasma membrane	75.93	74.95
Zm00001d047812_P001	Maize	extracellular	75.93	74.46
Bra009613.1-P	Field mustard	nucleus	70.46	73.18
TraesCS4A01G096600.1	Wheat	cytosol	73.09	72.14
TraesCS4D01G208700.1	Wheat	golgi	72.65	71.71
TraesCS4B01G207800.1	Wheat	cytosol	72.65	71.71
HORVU4Hr1G059840.1	Barley	cytosol	72.43	71.34
OQU92826	Sorghum	cytosol	76.37	70.79
Zm00001d037837_P002	Maize	endoplasmic reticulum, extracellular	39.61	58.77
Zm00001d006081_P001	Maize	cytosol	20.35	55.03
Zm00001d034225_P002	Maize	endoplasmic reticulum, extracellular	42.67	54.78
Zm00001d012754_P001	Maize	cytosol	34.79	50.48
Zm00001d052202_P001	Maize	cytosol	41.36	46.9
Zm00001d040358_P001	Maize	cytosol	42.89	38.43
Bra039764.1-P	Field mustard	endoplasmic reticulum	26.7	24.45
Bra000774.1-P	Field mustard	nucleus	28.45	18.73
Bra013624.1-P	Field mustard	cytosol	28.45	17.88
Bra020844.1-P	Field mustard	plastid	28.23	17.84
Bra000639.1-P	Field mustard	nucleus, plastid	29.32	17.11
Bra019814.1-P	Field mustard	cytosol	28.45	15.87
Bra008330.1-P	Field mustard	plastid	1.31	2.33

Protein Annotations

Gene3D:1.20.120.1290	Gene3D:2.40.160.120	MapMan:5.8.1.1	EnsemblPlantsGene:Bra002568	EnsemblPlants:Bra002568.1	EnsemblPlants:Bra002568.1-P
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0016020
GO:GO:0016021	UniProt:M4CED7	InterPro:OSBP_sf	InterPro:Oxysterol-bd	InterPro:Oxysterol-bd_CS	PFAM:PF01237
ScanProsite:PS01013	PANTHER:PTHR10972	PANTHER:PTHR10972:SF136	SUPFAM:SSF144000	TMHMM:TMhelix	UniParc:UPI0002543B1C
SEG:seg	:	:	:	:	:

Description

AT5G59420 (E=1e-257) ORP3C | ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C); oxysterol binding

Coordinates

chrA10:+:8832213..8834620

Molecular Weight (calculated)

51919.9 Da

IEP (calculated)

4.949

GRAVY (calculated)

-0.628

Length

457 amino acids

Sequence
(BLAST)

001: MGSPKKNENK GFFAAMTSGF SMFGSAMSRS VNGLLAYEGV EVINPDGGKE DAEEEAQRGR WKDEERDSYW KMMQKYIGSD ITSMVTLPVI IFEPMTMLQK
101: MAELMEYSYL LDQADECEDP YLRLVYASSW AISVYFAYQR TWKPFNPILG ETYEMANHGG ISFLSEQVSH HPPMSAGHAE NEHFTYDVTS KLKTKLLGNS
201: VDVYPVGRTR VTLKKDGVVL DLVPPLTKIH NLIFGRTWVD SPGEMVMTNI TTGDKVVLYF QPCGWFGSGR YEVDGYVYSA DEEPKIMMTG KWNEKISYQP
301: CDAEGEPLPG TELKEVWHVA DVPKNDKFQY THFAHKINSF DTAPSKLLAS DSRLRPDRYA LEQGDLSKAG SEKHSLEERQ RAEKRTRETK GQKFTPRWFD
401: LTDEITSTPW GDIEIYQYNG KYTEHRDSAA SSSGASNAED LKSIEFNPWQ YGNVSTE

Best Arabidopsis Sequence Match ( AT5G59420.1 )
(BLAST)

001: MGSPKKNENK GFFAAMTSGF SMFGTAVSRS VNGVQGNEGV EVINPEGGKE DAEEEAQKGR WKDEERDSYW KMMQKYIGSD ITSMVTLPVV IFEPMTMLQK
101: MAEIMEYSHL LDQADECEDP YLRLVYASSW AISVYYAFQR TWKPFNPILG ETYEMVNHGG ISFISEQVSH HPPMSAGHAE NEHFIYDITS KLKTKLLGNS
201: VDVYPVGRTR VTLKKDGVVL DLVPPLTKIH NLIFGRTWVD SPGEMVMTNL TTGDKVVLYF QPCGWFGSGR YEVDGYVYSA AEEPKIMMTG KWNEKMSYQP
301: CDAEGEPLPG TELKEVWHLA DVPKNDNFQY THFAHKINSF DTAPAKLLAS DSRIRPDRYS LEQGDLSKAG SEKHSLEERQ RAEKRTRETK GQKFTPRWFD
401: LTDEITPTPW GDIEVYQYNG KYNEHRDTAE SSSSASNETD LKSIEFNPWQ YGNISTE

Arabidopsis Description

ORP3COxysterol-binding protein-related protein 3C [Source:UniProtKB/Swiss-Prot;Acc:Q93Y40]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.