Factsheet for PGSC0003DMT400028593

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g084800.1.1	Tomato	extracellular, plastid	89.46	98.25
VIT_08s0007g00480.t01	Wine grape	cytosol	66.6	75.11
GSMUA_Achr1P17320_001	Banana	cytosol	68.79	75.05
GSMUA_Achr9P03900_001	Banana	cytosol	67.99	74.84
KRG99957	Soybean	cytosol, plastid	67.0	72.94
KRH49107	Soybean	endoplasmic reticulum	67.2	72.84
Os03t0274000-01	Rice	plasma membrane	67.0	72.79
TraesCS4D01G208700.1	Wheat	golgi	66.6	72.35
TraesCS4B01G207800.1	Wheat	cytosol	66.6	72.35
HORVU4Hr1G059840.1	Barley	cytosol	66.6	72.2
TraesCS4A01G096600.1	Wheat	cytosol	66.4	72.14
Zm00001d028606_P002	Maize	cytosol	65.81	71.8
Zm00001d047812_P001	Maize	extracellular	65.41	70.6
OQU92826	Sorghum	cytosol	65.61	66.94
Zm00001d037837_P002	Maize	endoplasmic reticulum, extracellular	34.39	56.17
Zm00001d006081_P001	Maize	cytosol	18.49	55.03
Zm00001d034225_P002	Maize	endoplasmic reticulum, extracellular	38.17	53.93
Zm00001d012754_P001	Maize	cytosol	31.21	49.84
Zm00001d052202_P001	Maize	cytosol	37.38	46.65
Zm00001d040358_P001	Maize	cytosol	39.36	38.82
PGSC0003DMT400020224	Potato	cytosol	26.24	20.21
PGSC0003DMT400012089	Potato	cytosol	27.44	18.98
PGSC0003DMT400074661	Potato	plastid	28.83	18.33
PGSC0003DMT400029169	Potato	nucleus	26.64	17.31
PGSC0003DMT400027973	Potato	cytosol	26.24	16.46

Protein Annotations

EMBL:AY450639	EnsemblPlants:PGSC0003DMT400028593	EnsemblPlantsGene:PGSC0003DMG401011006	Gene3D:1.20.120.1290	Gene3D:2.40.160.120	InterPro:OSBP_sf
InterPro:Oxysterol-bd	InterPro:Oxysterol-bd_CS	PANTHER:PTHR10972	PANTHER:PTHR10972:SF136	PFAM:PF01237	PGSC:PGSC0003DMG401011006
ProteinID:AAR25798	ProteinID:AAR25798.1	ScanProsite:PS01013	SEG:seg	SUPFAM:SSF144000	UniParc:UPI000294F0A7
UniProt:M1ARC8	MapMan:5.8.1.1	:	:	:	:

Description

Oxysterol-binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG401011006]

Coordinates

chr10:-:54348366..54355109

Molecular Weight (calculated)

56868.0 Da

IEP (calculated)

5.187

GRAVY (calculated)

-0.480

Length

503 amino acids

Sequence
(BLAST)

001: MASNKDGNQS GSGGGGGFFS FLGSSLTNIA KSVNGCFADV GSCKLSFFVL RSFLPDVPKF DVCYCVYISN MSQSCYYSSM LGHEGLEVVN PEGGNEDAGA
101: EAQRGRWKQE DRDNYWKMMQ KYIGADITSL VTLPVIICEP MTNLQKMAEL MEYSYLLELA DECEDPHMRL VYAATWFISL YHALQRTWKP FNPILGETYE
201: FVNHAGITFI AEQVCHHPPI GAAHAENEHF KYDITSKVKS KFLGNSVEVY PLGRSRLTLK KSGVVLDLVP PPTKVHNLIF GRTWIDSPGE MILTNLTTGD
301: KVLLYFQPCG WFGAGRYEVD GYVYNSEEEP KILMTGKWNE SISYQPCDLE GEPLPGSTMK EVWKAAEAPK NDKFQYTYFA HKINSFDTAP KKLLASDSRL
401: RPDRYALEIG DVSKASSEKS RLEERQRADR RTREAKGDEF KPKWFNLSNE MCPTPWGELE VYEYNGKYHE HRAAIDSSDH VEEADAKTAE FNPWQYEDSV
501: VSA

Best Arabidopsis Sequence Match ( AT5G02100.1 )
(BLAST)

001: MASNDPKNGG GFFASLASSI TNFGSAMSKS VNGLMGYEGL EVINPEGSTD DAEEEAGRGR WKQEERDGYW KMMQKYIGSD VTSMVTLPVI IFEPMTMLQK
101: MAELMEYSYL LDMADKTEDP YMRMVYASSW AISVYYAYQR TWKPFNPILG ETYEMTNHNG INFIAEQVCH HPPMSAGHAE NEHFAYDCTS KLKTKFLGNS
201: IDVYPVGRTR VTLKRDGVVL DLVPPLTKVH NLIFGRTWVD SPGEMVMTNL TTGDKVVLYF QPCGWFGSGR YEVDGYVYNS AEEPKMLMTG KWNESLSYQP
301: CDAEGEPLPG TELKEVWKVA EAPKNDKYQY THFAHKINSF DTAPKKLLSS DSRLRPDRYA LEMGDMSKSG FEKSSLEDRQ RAEKKSREEK GQKFAPKWFD
401: ETEEVTPTPW GDLEVYQFNG KYSVHRATAE NSEDTTDVKL TQFNPWQFQD LSA

Arabidopsis Description

ORP3AOxysterol-binding protein-related protein 3A [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.