Factsheet for GSMUA_Achr5P20840_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0554100-01	Rice	cytosol	52.63	74.38
Solyc08g078960.2.1	Tomato	cytosol	69.01	68.47
VIT_02s0154g00250.t01	Wine grape	mitochondrion	60.62	62.83
GSMUA_Achr11P...	Banana	cytosol	82.07	61.55
GSMUA_Achr11P...	Banana	cytosol	84.99	61.15
HORVU4Hr1G088060.4	Barley	mitochondrion	66.08	52.8
GSMUA_Achr6P36780_001	Banana	cytosol	69.79	51.88
PGSC0003DMT400012089	Potato	cytosol	68.62	48.42
AT4G12460.7	Thale cress	cytosol	64.52	47.69
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	67.64	47.6
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	68.03	47.48
AT4G22540.5	Thale cress	cytosol	66.67	47.43
TraesCS4B01G375900.1	Wheat	cytosol	66.47	47.36
CDY21272	Canola	nucleus	63.94	47.26
Bra000774.1-P	Field mustard	nucleus	63.94	47.26
TraesCS1A01G210800.1	Wheat	cytosol	68.03	47.23
HORVU1Hr1G053930.1	Barley	cytosol	67.84	47.15
TraesCS1D01G214100.1	Wheat	cytosol	68.03	47.03
TraesCS1B01G224800.1	Wheat	cytosol	68.03	47.03
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	66.67	46.79
CDX76366	Canola	cytosol	65.11	46.32
KRH77382	Soybean	cytosol	69.4	46.23
CDX82950	Canola	cytosol	65.5	46.22
CDX79161	Canola	cytosol	65.3	46.08
Bra013624.1-P	Field mustard	cytosol	65.3	46.08
Os08t0154900-00	Rice	cytosol	65.3	46.02
EER91955	Sorghum	cytosol, extracellular, nucleus	67.45	45.89
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	64.72	45.86
KRH28046	Soybean	cytosol	68.42	45.82
TraesCS7B01G202100.1	Wheat	cytosol	66.08	45.75
TraesCS7D01G297200.3	Wheat	cytosol	65.89	45.68
HORVU7Hr1G071680.28	Barley	cytosol	65.69	45.36
EES13369	Sorghum	cytosol	65.5	45.16
Zm00001d048544_P003	Maize	cytosol	65.69	45.11
KRH04091	Soybean	cytosol	67.45	45.05
Bra020844.1-P	Field mustard	plastid	63.35	44.95
TraesCS7A01G302000.3	Wheat	cytosol	65.69	44.93
KRH57364	Soybean	cytosol	67.25	44.81
CDY42177	Canola	cytosol	65.11	43.83
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	61.79	43.01
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	63.16	42.86
Zm00001d049556_P002	Maize	cytosol	58.67	40.9
GSMUA_Achr10P...	Banana	plastid	64.13	40.47
GSMUA_Achr9P02070_001	Banana	cytosol	58.09	39.63
GSMUA_Achr2P07260_001	Banana	plastid	53.8	39.15
CDX90832	Canola	nucleus	64.13	38.75
GSMUA_Achr6P06750_001	Banana	cytosol	56.73	38.44
GSMUA_Achr1P17320_001	Banana	cytosol	23.98	26.68
GSMUA_Achr9P03900_001	Banana	cytosol	23.59	26.48
GSMUA_Achr3P21140_001	Banana	nucleus	64.52	23.41

Protein Annotations

EnsemblPlants:GSMUA_Achr5P20840_001	EnsemblPlants:GSMUA_Achr5T20840_001	EnsemblPlantsGene:GSMUA_Achr5G20840_001	Gene3D:2.40.160.120	InterPro:OSBP_sf	InterPro:Oxysterol-bd
PANTHER:PTHR10972	PANTHER:PTHR10972:SF88	PFAM:PF01237	SEG:seg	SUPFAM:SSF144000	UniParc:UPI0002967D18
UniProt:M0T0B3	MapMan:35.1	:	:	:	:

Description

oxysterol-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G20840_001]

Coordinates

chr5:+:22725812..22738342

Molecular Weight (calculated)

59631.8 Da

IEP (calculated)

4.976

GRAVY (calculated)

-0.717

Length

513 amino acids

Sequence
(BLAST)

001: MNSEFSEYHR QLKLRYEEHL NSISTFHQQL EDLYLHMQEI DVEDLATSEG QLQLTKYDYS SSGHEKYNEY STTESSDDVE KQELDELSDE DELSFFDTNE
101: CFGDSAITCA SKVTASNDFD RISKLPDPIE KEKSVSLWSM IKDNVGKDLT RVCLPVYFNE PLSSLQKCFE DLEYSYLLDQ AYEYGKKGNS LMRILNVAAF
201: AVSGYSSSDG RLCKPFNPLL GETYEADYPE KGVRFFAEKV SHHPMLIACH CEGRGWKFWG DSNLRSKFWG QSIQLDPVGV LTLEFDDGEI FQWSKVTTTI
301: YNLILGKVYC NHHGTMNILG NQQYSCKLKF KEQSLLDRNP RQVQGFVEDI KGTKVATLLG KWDHSMYYSL SDKILKSKGS VLTENSALLW KRNKPPIDPT
401: RYNLTSFAIT LNELTSELTE KLPPTDSRLR PDQRYLENGE YEKANAEKLR LENRQRMSRK LQENGWKPRW FRRDSEHETF HYIGGYWEAR EKNKWEDCMD
501: IFGEFPNDAM VVP

Best Arabidopsis Sequence Match ( AT4G22540.4 )
(BLAST)

001: MNENLVKECE QIMLSEFSEM HGQVKLLHEE RTNLLDALRQ LEAANLEVGA SGKHEFSSLG RGKYSECSTT ASSDGKQEFE DVSEEDEPSF HDTKEFFNEP
101: NIGSESNLAI SGHTDIKRRT KLPDPAEKEK GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDRAYE HGKSGNGLLR ALNVAAFAVS
201: GYASTEGRHC KPFNPLLGET YEADFPEKGI RFFSEKVSHH PTVIACHCEG KGWKFWGDTN LRSKFWGRSI QVEPVGVLTL EFDDGEVFQW SKVTSTIYNI
301: ILGKLYCDHH GVMQIRGNRQ YSCTLKFKEQ SILERNPHQV NGFVEDVAGQ KAATIFGKWD DSLYYVAGDG INKSKVSDPA SNASLLWKRT KPPPNVTRYN
401: LTSFAITLNE LTPGLQEILP PTDSRLRPDQ RHLENGEYEK ANLEKQRLER RQRMSRQLQE SGWRPRWFER QGESDTFKYT GGYWEARGHR NWDDCPDIFG
501: EFTEELADAA

Arabidopsis Description

ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.