Factsheet for AT2G31020.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G024620.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	8.35	84.42
AT2G31030.1	Thale cress	cytosol	52.44	83.44
AT4G08180.4	Thale cress	cytosol	81.49	77.89
HORVU2Hr1G031380.1	Barley	cytosol	33.03	75.59
VIT_18s0001g03790.t01	Wine grape	cytosol	72.36	73.02
KRH64734	Soybean	plastid	73.14	72.67
KRH53184	Soybean	plastid	73.52	72.5
KRH16599	Soybean	plastid	71.85	71.3
KRH18807	Soybean	plastid	71.34	70.52
PGSC0003DMT400074661	Potato	plastid	70.69	69.53
Solyc11g013190.1.1	Tomato	nucleus, plastid	72.24	69.3
HORVU3Hr1G049220.1	Barley	cytosol	15.68	68.54
OQU91126	Sorghum	plastid	67.48	65.46
GSMUA_Achr10P...	Banana	plastid	67.61	64.7
TraesCS4A01G271700.1	Wheat	plastid	66.2	64.13
Zm00001d033669_P003	Maize	plastid	67.1	63.66
TraesCS4D01G039500.1	Wheat	plastid	66.07	62.84
TraesCS4B01G042300.2	Wheat	plastid	65.81	62.82
Zm00001d013470_P007	Maize	plastid	65.68	62.55
GSMUA_Achr2P07260_001	Banana	plastid	56.3	62.13
AT4G12460.7	Thale cress	cytosol	51.16	57.35
AT4G22540.5	Thale cress	cytosol	50.0	53.95
AT1G13170.2	Thale cress	cytosol	56.81	52.81
AT1G77730.1	Thale cress	plastid	16.07	47.17
GSMUA_Achr3P21140_001	Banana	nucleus	71.08	39.11
AT5G02100.1	Thale cress	cytosol, plastid	16.71	28.7
AT3G09300.1	Thale cress	nucleus, plastid	16.84	28.6
AT5G59420.1	Thale cress	cytosol, plastid	16.71	28.45

Protein Annotations

Gene3D:2.40.160.120	MapMan:35.1	EntrezGene:817653	UniProt:A0A178VQE1	UniProt:A0A2H1ZE51	ProteinID:AEC08479.2
ArrayExpress:AT2G31020	EnsemblPlantsGene:AT2G31020	RefSeq:AT2G31020	TAIR:AT2G31020	RefSeq:AT2G31020-TAIR-G	EnsemblPlants:AT2G31020.1
TAIR:AT2G31020.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0006869
GO:GO:0008150	GO:GO:0008289	InterPro:IPR001849	RefSeq:NP_180659.2	ProteinID:OAP08680.1	Symbol:ORP1A
InterPro:OSBP_sf	InterPro:Oxysterol-bd	PFAM:PF01237	PFAM:PF15413	InterPro:PH_domain	PO:PO:0000293
PFscan:PS50003	PANTHER:PTHR10972	PANTHER:PTHR10972:SF100	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729
UniParc:UPI0007DFC2CF	SEG:seg	:	:	:	:

Description

ORP1AORP1A [Source:UniProtKB/TrEMBL;Acc:A0A178VQE1]

Coordinates

chr2:+:13201350..13204948

Molecular Weight (calculated)

89272.2 Da

IEP (calculated)

6.740

GRAVY (calculated)

-0.723

Length

778 amino acids

Sequence
(BLAST)

001: MHPFCCVSDH SPSTPSFSMY AATPETPFGS ARSQPVITRS VSQRYNHPGQ SNHHHLLHSL SFNHQNVLAL PAAAREPPVD VKINDIAGNS IAGILYKWVN
101: YGKGWRPRWF VLQDGVLSYY KIKGPDKIVV IHETEKGSRV IGEESTRMIS RNKRHAATNN TNHQLRRKPF GEVHLKVSSI RESRSDDKRF SIFTGTKRLH
201: LRAETREDRE AWIEALQAVK DMFPRMSNCE LMAPTNNLDI SIEKLRLRLV EEGVSESAIQ DCEQITRSEF SAIQSQLLLL KQKQWLLIDT LRQLETEKVD
301: LENTVVDETQ RQAGNGDSEE TISESDDDNE QFDEAEEEMD TCDSLSSSSF KSIGSVFRTS SFSSDDDGLT NGFESENDDV DPSIKTIGFN YPHVKRRKKL
401: PDPVEKEKSV SLWSMIKDNI GKDLTKVCLP VYFNEPLSSL QKCFEDLEYS YLLDQASEWG KRGNNLMRIL NVAAFAVSGY ASTEGRICKP FNPMLGETYE
501: ADYPDKGLRF FSEKVSHHPM IVACHCDGTG WKFWGDSNLK SKFWGRSIQL DPIGLLTLQF DDGEIVQWSK VTTSIYNLIL GKLYCDHYGT MKIEGNGEYS
601: CKLKFKEQSM IDRNPHQVQG IVEDKNGKTV ARLFGKWDES IHYVMVDQGK VNESHLLWKR NKQPENPTKY NLTRFGITLN ELTPGLKEKL PPTDSRLRPD
701: QRYLEKGEYE MGNAEKLRLE QRQRQAREMQ ERGWKPKWFR KEKGSETYRY IGGYWEARDS GSWDDCPDIF GQVHQSIK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.