Factsheet for Bra019064.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 8
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	endoplasmic reticulum, vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46659	Canola	cytosol	100.0	100.0
CDX92819	Canola	endoplasmic reticulum, extracellular	99.37	99.37
Bra019067.1-P	Field mustard	vacuole	58.86	53.76
Bra038483.1-P	Field mustard	vacuole	59.49	52.51
Bra026372.1-P	Field mustard	extracellular	40.51	52.46
Bra010409.1-P	Field mustard	vacuole	56.33	52.05
Bra026375.1-P	Field mustard	vacuole	58.23	51.11
Bra026373.1-P	Field mustard	vacuole	57.59	50.0
AT5G54740.1	Thale cress	extracellular, vacuole	51.27	49.09
Bra026374.1-P	Field mustard	vacuole	58.86	47.94
Bra006444.1-P	Field mustard	vacuole	55.7	47.83

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.1	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	EnsemblPlantsGene:Bra019064	EnsemblPlants:Bra019064.1
EnsemblPlants:Bra019064.1-P	GO:GO:0003674	GO:GO:0007275	GO:GO:0008150	GO:GO:0009555	GO:GO:0045735
UniProt:M4DRC1	InterPro:Napin	PFAM:PF00234	PRINTS:PR00496	PANTHER:PTHR35496	SMART:SM00499
SUPFAM:SSF47699	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000254126F	SEG:seg	:

Description

AT4G27150 (E=6e-049) | 2S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2

Coordinates

chrA03:+:26484333..26484809

Molecular Weight (calculated)

18074.6 Da

IEP (calculated)

7.573

GRAVY (calculated)

-0.397

Length

158 amino acids

Sequence
(BLAST)

001: MANKIFLVCA TLAFCVLLTN ASIYRTVVEF DEDDTTDQIG PFRPPQKCQR EFQQEQHLRA CQQWIRQQLA GSPFSENQWG PQQGPSLREQ CCNELYQEDQ
101: VCVCPTLKQA AKSVRVQGQH GPFQSTRIYQ IAKNLPNVCN MKQIGTCPFI AIPFFPPY

Best Arabidopsis Sequence Match ( AT4G27160.1 )
(BLAST)

001: MANKLFLVCA TLALCFLLTN ASIYRTVVEF EEDDASNPVG PRQRCQKEFQ QSQHLRACQR WMSKQMRQGR GGGPSLDDEF DFEGPQQGYQ LLQQCCNELR
101: QEEPVCVCPT LKQAARAVSL QGQHGPFQSR KIYQSAKYLP NICKIQQVGE CPFQTTIPFF PPYY

Arabidopsis Description

AT2S32S seed storage protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P15459]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.