Skip to main content
crop-pal logo
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 6
  • vacuole 8
  • nucleus 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32264 Canola cytosol 100.0 100.0
Bra026375.1-P Field mustard vacuole 94.97 94.44
Bra026372.1-P Field mustard extracellular 62.57 91.8
Bra026373.1-P Field mustard vacuole 93.3 91.76
Bra026374.1-P Field mustard vacuole 94.41 87.11
Bra006444.1-P Field mustard vacuole 88.27 85.87
Bra019067.1-P Field mustard vacuole 73.18 75.72
AT4G27140.1 Thale cress extracellular, vacuole 64.25 70.12
Bra010409.1-P Field mustard vacuole 64.25 67.25
AT4G27170.1 Thale cress extracellular, vacuole 60.89 65.66
AT4G27160.1 Thale cress extracellular, vacuole 59.78 65.24
AT4G27150.1 Thale cress extracellular 59.78 62.94
Bra019064.1-P Field mustard extracellular, vacuole 52.51 59.49
Protein Annotations
Gene3D:1.10.110.10MapMan:35.1InterPro:Bifun_inhib/LTP/seed_sfInterPro:Bifunc_inhib/LTP/seed_storeEnsemblPlantsGene:Bra038483EnsemblPlants:Bra038483.1
EnsemblPlants:Bra038483.1-PGO:GO:0003674GO:GO:0045735UniProt:M4FBL7InterPro:NapinPFAM:PF00234
PRINTS:PR00496PANTHER:PTHR35496SMART:SM00499SUPFAM:SSF47699SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0002544502SEG:seg::::
Description
AT4G27140 (E=1e-047) | 2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1
Coordinates
chrA01:-:10936875..10937414
Molecular Weight (calculated)
20244.2 Da
IEP (calculated)
7.311
GRAVY (calculated)
-0.580
Length
179 amino acids
Sequence
(BLAST)
001: MANKLFLVSA TLAFFFLLTN ASIYRTVVEF DEDDATNPAG PFRIPKCRKE FQQAQHLKAC QQWLHKQAMQ SGSGPSWTLD GEFDFEDDME NPQGPQQRPP
101: LLQQCCNELH QEEPLCVCPT LKGASKAVKQ QIQQQQGQQQ GKQQMVSRIY QTATHLPKVC NIPQVSVCPF QKTMPGPSY
Best Arabidopsis Sequence Match ( AT4G27170.1 )
(BLAST)
001: MANKLFLVCA ALALCFILTN ASVYRTVVEF DEDDASNPIG PIQKCQKEFQ QDQHLRACQR WMRKQMWQGR GGGPSLDDEF DMEDDIENPQ RRQLLQKCCS
101: ELRQEEPVCV CPTLRQAAKA VRFQGQQHQP EQVRKIYQAA KYLPNICKIQ QVGVCPFQIP SIPSYY
Arabidopsis Description
AT2S42S seed storage protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P15460]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.