Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- endoplasmic reticulum 5
- plasma membrane 4
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G27160.1 | Thale cress | extracellular, vacuole | 87.06 | 90.24 |
| AT4G27170.1 | Thale cress | extracellular, vacuole | 80.0 | 81.93 |
| AT4G27140.1 | Thale cress | extracellular, vacuole | 70.0 | 72.56 |
| CDY29278 | Canola | vacuole | 62.35 | 61.63 |
| CDX89273 | Canola | cytosol | 62.35 | 61.63 |
| CDY29281 | Canola | vacuole | 62.35 | 61.27 |
| CDX89275 | Canola | vacuole | 61.76 | 61.05 |
| CDY29280 | Canola | vacuole | 61.76 | 60.69 |
| CDX89271 | Canola | vacuole | 61.18 | 60.47 |
| CDY46662 | Canola | vacuole | 61.18 | 60.12 |
| Bra019067.1-P | Field mustard | vacuole | 61.18 | 60.12 |
| CDY32264 | Canola | cytosol | 62.94 | 59.78 |
| Bra038483.1-P | Field mustard | vacuole | 62.94 | 59.78 |
| CDX70800 | Canola | vacuole | 61.18 | 59.09 |
| CDY61462 | Canola | vacuole | 62.35 | 58.89 |
| Bra026375.1-P | Field mustard | vacuole | 61.76 | 58.33 |
| CDY29279 | Canola | vacuole | 61.76 | 58.33 |
| CDX89270 | Canola | vacuole | 42.94 | 57.94 |
| Bra026372.1-P | Field mustard | extracellular | 41.18 | 57.38 |
| CDY51244 | Canola | cytosol | 62.35 | 56.99 |
| Bra026373.1-P | Field mustard | vacuole | 60.59 | 56.59 |
| Bra010409.1-P | Field mustard | vacuole | 55.88 | 55.56 |
| Bra006444.1-P | Field mustard | vacuole | 60.0 | 55.43 |
| Bra026374.1-P | Field mustard | vacuole | 62.35 | 54.64 |
| AT5G54740.1 | Thale cress | extracellular, vacuole | 51.18 | 52.73 |
| CDX97380 | Canola | cytosol | 26.47 | 37.5 |
| CDY14281 | Canola | cytosol, nucleus, plastid | 24.71 | 35.0 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.1 | EntrezGene:828823 | UniProt:A0A178V1B5 | ProteinID:AAA32744.1 | ProteinID:AEE85307.1 |
| ArrayExpress:AT4G27150 | EnsemblPlantsGene:AT4G27150 | RefSeq:AT4G27150 | TAIR:AT4G27150 | RefSeq:AT4G27150-TAIR-G | EnsemblPlants:AT4G27150.1 |
| TAIR:AT4G27150.1 | Unigene:At.43652 | EMBL:BT002073 | EMBL:BT006557 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store |
| ProteinID:CAA80871.1 | ProteinID:CAB38845.1 | ProteinID:CAB79570.1 | GO:GO:0003674 | GO:GO:0045735 | RefSeq:NP_194445.1 |
| InterPro:Napin | ProteinID:OAP00140.1 | UniProt:P15458 | PFAM:PF00234 | PO:PO:0001170 | PRINTS:PR00496 |
| PANTHER:PTHR35496 | Symbol:SESA2 | SMART:SM00499 | SUPFAM:SSF47699 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0000001B16 | EMBL:Z17594 | EMBL:Z17598 | SEG:seg | : | : |
Description
AT2S2SESA2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1B5]
Coordinates
chr4:+:13609341..13610075
Molecular Weight (calculated)
19362.3 Da
IEP (calculated)
7.195
GRAVY (calculated)
-0.525
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MANKLFLVCA TFALCFLLTN ASIYRTVVEF DEDDASNPMG PRQKCQKEFQ QSQHLRACQK LMRMQMRQGR GGGPSLDDEF DLEDDIENPQ GPQQGHQILQ
101: QCCSELRQEE PVCVCPTLRQ AARAVSLQGQ HGPFQSRKIY KTAKYLPNIC KIQQVGECPF QTTIPFFPPY
101: QCCSELRQEE PVCVCPTLRQ AARAVSLQGQ HGPFQSRKIY KTAKYLPNIC KIQQVGECPF QTTIPFFPPY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.