Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13748 | Canola | cytosol, endoplasmic reticulum, nucleus | 46.92 | 65.56 |
| Bra038513.1-P | Field mustard | nucleus | 82.46 | 59.39 |
| CDY15856 | Canola | plastid | 27.01 | 34.55 |
| CDY25598 | Canola | cytosol | 50.24 | 25.98 |
| CDX89471 | Canola | cytosol | 47.39 | 24.75 |
| AT2G21930.2 | Thale cress | cytosol | 40.28 | 21.46 |
| CDX78751 | Canola | cytosol | 22.75 | 18.97 |
| CDY15855 | Canola | cytosol | 23.22 | 18.49 |
| CDX70764 | Canola | cytosol | 12.32 | 17.81 |
| CDX90297 | Canola | cytosol, nucleus, plastid | 14.69 | 12.92 |
Protein Annotations
| EnsemblPlants:CDX76908 | EnsemblPlantsGene:GSBRNA2T00127432001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-assoc_dom_typ3 |
| InterPro:F-box-assoc_interact_dom | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR31790 | PANTHER:PTHR31790:SF10 |
| PFAM:PF00646 | PFAM:PF08268 | ProteinID:CDX76908 | ProteinID:CDX76908.1 | SEG:seg | SUPFAM:SSF81383 |
| TIGRFAMs:TIGR01640 | UniParc:UPI0004EEEAC9 | MapMan:35.2 | : | : | : |
Description
BnaC08g34940D
Coordinates
chrLK031808:-:1996253..1997315
Molecular Weight (calculated)
24423.8 Da
IEP (calculated)
10.585
GRAVY (calculated)
-0.175
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MEILKRFPVK TLARLTCVSK LWASTIRRQE FNKLWSSSNQ QRRSSSSSTL IFAFKQSLHI CIDGVLYYGA CFGTGTTTTV VGKGRGVMSF DVRSEKFDVI
101: TVPQGRARKF TSMTRYDGKL ALINAVFWRM LLNVNGPLRF SICRDWAFVL APKELQESAF FVLYYDPKKK RVRKVDVEGI TEHEELPLWD KDWKRRTVSI
201: FPGQVENLMF L
101: TVPQGRARKF TSMTRYDGKL ALINAVFWRM LLNVNGPLRF SICRDWAFVL APKELQESAF FVLYYDPKKK RVRKVDVEGI TEHEELPLWD KDWKRRTVSI
201: FPGQVENLMF L
001: MQRQRANDTV TTFRYNTRSS SRHGISNTLR VVESKTSASS PRVRRWRKKV SDDRRSTNSD LLPMDLIKEI LKRLPAKTLA RFLCVSKLWS SIIRSRDLMK
101: LFLTESSARP GRLFFTFRRK DDCFLFSSEE SSVATYLFTI PASGYTNNCS FVHGLICYGT TAYASQLVVY NSSTRRSITL PEIEARSFVL KHLLGYDPID
201: GVYKVLCMTV PRLVLQKKKK LRNNVTDAGE LILAPISLPD PPYYVIYYDP QRQSTRKVVI RGITEHNCKL LRCKKRHPCI LYYVFSSQVE SLMFM
101: LFLTESSARP GRLFFTFRRK DDCFLFSSEE SSVATYLFTI PASGYTNNCS FVHGLICYGT TAYASQLVVY NSSTRRSITL PEIEARSFVL KHLLGYDPID
201: GVYKVLCMTV PRLVLQKKKK LRNNVTDAGE LILAPISLPD PPYYVIYYDP QRQSTRKVVI RGITEHNCKL LRCKKRHPCI LYYVFSSQVE SLMFM
Arabidopsis Description
Putative F-box protein At5g44220 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFG9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.