CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000659.1-P	Field mustard	mitochondrion	98.83	99.12
CDY05032	Canola	mitochondrion	98.25	98.53
AT4G08900.1	Thale cress	mitochondrion	93.27	93.27
HORVU2Hr1G005320.1	Barley	plastid	76.02	91.23
GSMUA_Achr5P14460_001	Banana	plastid	85.96	89.09
EES10350	Sorghum	mitochondrion	86.55	87.06
Os04t0106300-01	Rice	mitochondrion	86.26	86.76
KRH03979	Soybean	mitochondrion	85.38	86.39
Solyc01g091160.2.1	Tomato	plastid	85.38	86.39
TraesCS2D01G034900.1	Wheat	mitochondrion	85.38	85.88
KRH76217	Soybean	mitochondrion	84.8	85.8
TraesCS2A01G035700.1	Wheat	mitochondrion	83.04	84.78
Solyc01g091170.2.1	Tomato	plastid	83.04	84.02
Zm00001d024908_P003	Maize	mitochondrion	86.26	80.38
VIT_15s0048g00420.t01	Wine grape	cytosol, mitochondrion, plastid	85.38	78.71
KRH65329	Soybean	cytosol, nucleus	74.27	75.15
TraesCS2B01G048700.1	Wheat	cytosol	85.38	70.19
KRH76207	Soybean	cytosol, extracellular	48.83	65.49

Protein Annotations

KEGG:00330+3.5.3.11	Gene3D:3.40.800.10	MapMan:4.2.1.1	GO:A0A078DND2	InterPro:Agmatinase-rel	EnsemblPlants:CDX90700
ProteinID:CDX90700	ProteinID:CDX90700.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0016787
GO:GO:0016813	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00151372001	InterPro:IPR006035	PFAM:PF00491	PIRSF:PIRSF036979
ScanProsite:PS01053	PFscan:PS51409	PANTHER:PTHR11358	PANTHER:PTHR11358:SF32	MetaCyc:PWY-40	MetaCyc:PWY-6305
SUPFAM:SSF52768	TIGRFAMs:TIGR01230	UniPathway:UPA00534	UniParc:UPI0004EEBC12	InterPro:Ureohydrolase	InterPro:Ureohydrolase_Mn_BS
InterPro:Ureohydrolase_dom_sf	SEG:seg	:	:	:	:

Description

BnaA03g23800D

Coordinates

chrLK031864:+:41573..43551

Molecular Weight (calculated)

37377.9 Da

IEP (calculated)

6.325

GRAVY (calculated)

-0.212

Length

342 amino acids

Sequence
(BLAST)

001: MFLKIGQRGI RHLQRSSTAS FTTVSASSIE KGQNRVVDAS LTLIRERAKL KGELVRLLGG AKASTSLLGV PLGHNSSFLQ GPAFAPPRIR EAIWCGSTNS
101: STEEGKELKD PRVLTDVGDV PVQEIRDCGV DDDRLMNVIS ESVKLVMEEE PLRPLVLGGD HSISYPVIRA VSEKLGGPVD VLHLDAHPDI YDCFEGNKYS
201: HASSFARIME GGYARRLLQV GIRSINKEGR EQGKRFGVEQ YEMRTFSRDR EVLENLKLGE GVKGVYISID VDCLDPAFAP GVSHIEPGGL SFRDVLNILH
301: NLEGDVVGAD VVEFNPQRDT VDGMTAMVAA KLVRELAAKI SK

Best Arabidopsis Sequence Match ( AT4G08900.1 )
(BLAST)

001: MSRIIGRKGI NYIHRLNSAS FTSVSASSIE KGQNRVIDAS LTLIRERAKL KGELVRLLGG AKASTSLLGV PLGHNSSFLQ GPAFAPPRIR EAIWCGSTNS
101: ATEEGKELKD PRVLTDVGDV PVQEIRDCGV DDDRLMNVIS ESVKLVMEEE PLRPLVLGGD HSISYPVVRA VSEKLGGPVD ILHLDAHPDI YDCFEGNKYS
201: HASSFARIME GGYARRLLQV GIRSINQEGR EQGKRFGVEQ YEMRTFSKDR PMLENLKLGE GVKGVYISID VDCLDPAFAP GVSHIEPGGL SFRDVLNILH
301: NLQADVVGAD VVEFNPQRDT VDGMTAMVAA KLVRELAAKI SK

Arabidopsis Description

ARGAH1Arginase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46637]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.