Factsheet for Solyc01g091170.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

plastid: 20363867
plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g091160.2.1	Tomato	plastid	89.35	89.35
GSMUA_Achr4P18050_001	Banana	cytosol	26.04	88.0
HORVU2Hr1G005320.1	Barley	plastid	72.19	85.61
Bra000659.1-P	Field mustard	mitochondrion	84.32	83.58
CDY05032	Canola	mitochondrion	84.32	83.58
AT4G08900.1	Thale cress	mitochondrion	84.32	83.33
CDX90700	Canola	mitochondrion	84.02	83.04
AT4G08870.1	Thale cress	mitochondrion	82.84	81.4
EES10350	Sorghum	mitochondrion	81.36	80.88
Os04t0106300-01	Rice	mitochondrion	81.07	80.59
TraesCS2D01G034900.1	Wheat	mitochondrion	80.77	80.29
KRH03979	Soybean	mitochondrion	79.29	79.29
KRH76217	Soybean	mitochondrion	79.29	79.29
TraesCS2A01G035700.1	Wheat	mitochondrion	78.11	78.81
VIT_15s0048g00420.t01	Wine grape	cytosol, mitochondrion, plastid	83.43	76.01
Zm00001d024908_P003	Maize	mitochondrion	80.77	74.39
KRH65329	Soybean	cytosol, nucleus	74.26	74.26
GSMUA_Achr4P18060_001	Banana	cytosol	51.48	73.11
KRH76207	Soybean	cytosol, extracellular	50.59	67.06
TraesCS2B01G048700.1	Wheat	cytosol	80.47	65.38

Protein Annotations

Gene3D:3.40.800.10	MapMan:4.2.1.1	EMBL:AY656838	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0016787	GO:GO:0016813	GO:GO:0046872	InterPro:IPR006035	PFAM:PF00491	PIRSF:PIRSF036979
ScanProsite:PS01053	PFscan:PS51409	PANTHER:PTHR11358	PANTHER:PTHR11358:SF32	UniProt:Q5UNS1	SUPFAM:SSF52768
EnsemblPlantsGene:Solyc01g091170.2	EnsemblPlants:Solyc01g091170.2.1	UniParc:UPI000045426F	InterPro:Ureohydrolase	InterPro:Ureohydrolase_Mn_BS	InterPro:Ureohydrolase_dom_sf

Description

Arginase 2 [Source:UniProtKB/TrEMBL;Acc:Q5UNS1]

Coordinates

chr1:+:84863098..84865316

Molecular Weight (calculated)

36854.2 Da

IEP (calculated)

5.690

GRAVY (calculated)

-0.197

Length

338 amino acids

Sequence
(BLAST)

001: MKSAGSMGIN YMQKLLTSNV PKEVVKRGQD RVVEASLTLI RERAKLKGEL VRGLGGAVAS TSLLGIPLGH NSSFLQGPAF APPLIREAIW CGSTNSTTEE
101: GKILDDQRVL TDVGDLPVQE LRDTGIDDDR LMSTVSESVK LVMDENPLRP LVLGGDHSIS YPVVRAVSEK LGGPVDILHL DAHPDIYDAF EGNKYSHASS
201: FARIMEGGYA RRLLQVGIRS INLEGREQGK RFGVEQYEMR TFSRDRQFLE NLKLGEGVKG VYISVDVDCL DPAFAPGVSH FESGGLSFRD VLNILHNLQG
301: DIVGADVVEY NPQRDTADGM TAMVAAKLVR ELAAKMSK

Best Arabidopsis Sequence Match ( AT4G08900.1 )
(BLAST)

001: MSRIIGRKGI NYIHRLNSAS FTSVSASSIE KGQNRVIDAS LTLIRERAKL KGELVRLLGG AKASTSLLGV PLGHNSSFLQ GPAFAPPRIR EAIWCGSTNS
101: ATEEGKELKD PRVLTDVGDV PVQEIRDCGV DDDRLMNVIS ESVKLVMEEE PLRPLVLGGD HSISYPVVRA VSEKLGGPVD ILHLDAHPDI YDCFEGNKYS
201: HASSFARIME GGYARRLLQV GIRSINQEGR EQGKRFGVEQ YEMRTFSKDR PMLENLKLGE GVKGVYISID VDCLDPAFAP GVSHIEPGGL SFRDVLNILH
301: NLQADVVGAD VVEFNPQRDT VDGMTAMVAA KLVRELAAKI SK

Arabidopsis Description

ARGAH1Arginase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46637]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.