CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G005320.1	Barley	plastid	81.47	97.19
Os04t0106300-01	Rice	mitochondrion	94.71	94.71
TraesCS2D01G034900.1	Wheat	mitochondrion	94.41	94.41
TraesCS2A01G035700.1	Wheat	mitochondrion	91.18	92.54
Zm00001d024908_P003	Maize	mitochondrion	99.12	91.83
GSMUA_Achr5P14460_001	Banana	plastid	86.18	88.79
AT4G08900.1	Thale cress	mitochondrion	87.35	86.84
Bra000659.1-P	Field mustard	mitochondrion	87.06	86.8
CDX90700	Canola	mitochondrion	87.06	86.55
CDY05032	Canola	mitochondrion	86.76	86.51
Solyc01g091160.2.1	Tomato	plastid	85.0	85.5
KRH03979	Soybean	mitochondrion	82.35	82.84
KRH76217	Soybean	mitochondrion	82.06	82.54
Solyc01g091170.2.1	Tomato	plastid	80.88	81.36
VIT_15s0048g00420.t01	Wine grape	cytosol, mitochondrion, plastid	86.18	78.98
TraesCS2B01G048700.1	Wheat	cytosol	94.12	76.92
KRH65329	Soybean	cytosol, nucleus	72.35	72.78
KRH76207	Soybean	cytosol, extracellular	47.65	63.53

Protein Annotations

Gene3D:3.40.800.10	MapMan:4.2.1.1	EntrezGene:8057337	UniProt:C5YBK6	EnsemblPlants:EES10350	ProteinID:EES10350
ProteinID:EES10350.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004053	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006527	GO:GO:0006560
GO:GO:0006570	GO:GO:0006591	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008783
GO:GO:0009056	GO:GO:0009058	GO:GO:0009445	GO:GO:0009446	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016787	GO:GO:0016813
GO:GO:0033389	GO:GO:0042742	GO:GO:0046872	GO:GO:0050832	GO:GO:0050897	InterPro:IPR006035
PFAM:PF00491	PIRSF:PIRSF036979	ScanProsite:PS01053	PFscan:PS51409	PANTHER:PTHR11358	PANTHER:PTHR11358:SF32
EnsemblPlantsGene:SORBI_3006G004500	SUPFAM:SSF52768	unigene:Sbi.15230	UniParc:UPI0000F07EDC	InterPro:Ureohydrolase	InterPro:Ureohydrolase_Mn_BS
InterPro:Ureohydrolase_dom_sf	RefSeq:XP_002446022.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:779843..784384

Molecular Weight (calculated)

36979.3 Da

IEP (calculated)

6.065

GRAVY (calculated)

-0.206

Length

340 amino acids

Sequence
(BLAST)

001: MGGAAAGTKW IHHIQRLSAA KVSTEAVERG QSRVIDASLT LIRERAKLKA ELLRALGGVK ASASLLGVPL GHNSSFLQGP AFAPPRIREA IWCGSTNSST
101: EEGKELNDPR VLTDVGDVPI QEIRDCGVED DRLMHVISES VKTVMEEEPL RPLVLGGDHS ISYPVVRAVS EKLGGPVDIL HLDAHPDIYD CFEGNTYSHA
201: SSFARIMEGG YARRLLQVGL RSITKEGREQ GKRFGVEQYE MRTFSKDREK LENLKLGEGV KGVYVSVDVD CLDPAFAPGV SHIEPGGLSF RDVLNILQNL
301: QGDVVAADVV EFNPQRDTVD GMTAMVAAKL VRELTAKISK

Best Arabidopsis Sequence Match ( AT4G08900.1 )
(BLAST)

001: MSRIIGRKGI NYIHRLNSAS FTSVSASSIE KGQNRVIDAS LTLIRERAKL KGELVRLLGG AKASTSLLGV PLGHNSSFLQ GPAFAPPRIR EAIWCGSTNS
101: ATEEGKELKD PRVLTDVGDV PVQEIRDCGV DDDRLMNVIS ESVKLVMEEE PLRPLVLGGD HSISYPVVRA VSEKLGGPVD ILHLDAHPDI YDCFEGNKYS
201: HASSFARIME GGYARRLLQV GIRSINQEGR EQGKRFGVEQ YEMRTFSKDR PMLENLKLGE GVKGVYISID VDCLDPAFAP GVSHIEPGGL SFRDVLNILH
301: NLQADVVGAD VVEFNPQRDT VDGMTAMVAA KLVRELAAKI SK

Arabidopsis Description

ARGAH1Arginase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46637]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.