Factsheet for Solyc01g091160.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

plastid: 20363867
plastid: 22908117
plastid: 26371478

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P18050_001	Banana	cytosol	27.22	92.0
Solyc01g091170.2.1	Tomato	plastid	89.35	89.35
HORVU2Hr1G005320.1	Barley	plastid	73.96	87.72
AT4G08900.1	Thale cress	mitochondrion	88.46	87.43
Bra000659.1-P	Field mustard	mitochondrion	86.69	85.92
CDY05032	Canola	mitochondrion	86.69	85.92
CDX90700	Canola	mitochondrion	86.39	85.38
EES10350	Sorghum	mitochondrion	85.5	85.0
Os04t0106300-01	Rice	mitochondrion	84.62	84.12
KRH03979	Soybean	mitochondrion	83.14	83.14
TraesCS2D01G034900.1	Wheat	mitochondrion	83.43	82.94
KRH76217	Soybean	mitochondrion	82.84	82.84
TraesCS2A01G035700.1	Wheat	mitochondrion	80.77	81.49
VIT_15s0048g00420.t01	Wine grape	cytosol, mitochondrion, plastid	89.35	81.4
AT4G08870.1	Thale cress	mitochondrion	82.84	81.4
Zm00001d024908_P003	Maize	mitochondrion	84.91	78.2
GSMUA_Achr4P18060_001	Banana	cytosol	54.44	77.31
KRH65329	Soybean	cytosol, nucleus	73.96	73.96
TraesCS2B01G048700.1	Wheat	cytosol	83.14	67.55
KRH76207	Soybean	cytosol, extracellular	48.82	64.71

Protein Annotations

Gene3D:3.40.800.10	MapMan:4.2.1.1	EMBL:AY656837	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0016787	GO:GO:0016813	GO:GO:0046872	InterPro:IPR006035	PFAM:PF00491	PIRSF:PIRSF036979
ScanProsite:PS01053	PFscan:PS51409	PANTHER:PTHR11358	PANTHER:PTHR11358:SF32	UniProt:Q5UNS2	SUPFAM:SSF52768
EnsemblPlantsGene:Solyc01g091160.2	EnsemblPlants:Solyc01g091160.2.1	UniParc:UPI000045426E	InterPro:Ureohydrolase	InterPro:Ureohydrolase_Mn_BS	InterPro:Ureohydrolase_dom_sf

Description

Arginase 1 [Source:UniProtKB/TrEMBL;Acc:Q5UNS2]

Coordinates

chr1:+:84851869..84856228

Molecular Weight (calculated)

37051.6 Da

IEP (calculated)

6.358

GRAVY (calculated)

-0.235

Length

338 amino acids

Sequence
(BLAST)

001: MRSAGRMGIH YMQKLHASNV PKELVEKGQN RVIEASLTLI RERAKLKGEL VRALGGAVAS TSLLGVPLGH NSSFLQGPAF APPRIREAMW CGSTNSTTEE
101: GKELDDPRIL TDVGDVPVQE LRDAGVDDDR LMSIISESVK LVMEENPLRP LVLGGDHSIS YPVVRAVSEK LGGPIDILHL DAHPDIYHAF EGNKYSHASS
201: FARIMEGGYA RRLLQVGIRS INKEGREQGK RFGVEQYEMR TFSQDRQFLE NLKLGEGVKG VYISVDVDCM DPAFAPGVSH IEPGGLSFRD VLNILHNLQA
301: DVVGADVVEF NPQRDTVDGM TAMVAAKLVR ELTAKISK

Best Arabidopsis Sequence Match ( AT4G08900.1 )
(BLAST)

001: MSRIIGRKGI NYIHRLNSAS FTSVSASSIE KGQNRVIDAS LTLIRERAKL KGELVRLLGG AKASTSLLGV PLGHNSSFLQ GPAFAPPRIR EAIWCGSTNS
101: ATEEGKELKD PRVLTDVGDV PVQEIRDCGV DDDRLMNVIS ESVKLVMEEE PLRPLVLGGD HSISYPVVRA VSEKLGGPVD ILHLDAHPDI YDCFEGNKYS
201: HASSFARIME GGYARRLLQV GIRSINQEGR EQGKRFGVEQ YEMRTFSKDR PMLENLKLGE GVKGVYISID VDCLDPAFAP GVSHIEPGGL SFRDVLNILH
301: NLQADVVGAD VVEFNPQRDT VDGMTAMVAA KLVRELAAKI SK

Arabidopsis Description

ARGAH1Arginase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46637]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.