Factsheet for TraesCS2B01G048700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G034900.1	Wheat	mitochondrion	81.49	99.71
HORVU2Hr1G005320.1	Barley	plastid	68.27	99.65
TraesCS2A01G035700.1	Wheat	mitochondrion	76.68	95.22
EES10350	Sorghum	mitochondrion	76.92	94.12
Os04t0106300-01	Rice	mitochondrion	75.0	91.76
GSMUA_Achr5P14460_001	Banana	plastid	69.47	87.58
Zm00001d024908_P003	Maize	mitochondrion	76.2	86.38
Bra000659.1-P	Field mustard	mitochondrion	70.19	85.63
CDX90700	Canola	mitochondrion	70.19	85.38
CDY05032	Canola	mitochondrion	69.95	85.34
AT4G08900.1	Thale cress	mitochondrion	69.47	84.5
KRH03979	Soybean	mitochondrion	68.03	83.73
KRH76217	Soybean	mitochondrion	67.79	83.43
Solyc01g091160.2.1	Tomato	plastid	67.55	83.14
Solyc01g091170.2.1	Tomato	plastid	65.38	80.47
VIT_15s0048g00420.t01	Wine grape	cytosol, mitochondrion, plastid	69.71	78.17
KRH65329	Soybean	cytosol, nucleus	59.38	73.08
KRH76207	Soybean	cytosol, extracellular	38.94	63.53

Protein Annotations

Gene3D:3.40.800.10	MapMan:4.2.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004053	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006527	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0008783	GO:GO:0009056	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016787	GO:GO:0016813
GO:GO:0033389	GO:GO:0042742	GO:GO:0046872	GO:GO:0050897	InterPro:IPR006035	PFAM:PF00491
PIRSF:PIRSF036979	ScanProsite:PS01053	PFscan:PS51409	PANTHER:PTHR11358	PANTHER:PTHR11358:SF32	SUPFAM:SSF52768
EnsemblPlantsGene:TraesCS2B01G048700	EnsemblPlants:TraesCS2B01G048700.1	InterPro:Ureohydrolase	InterPro:Ureohydrolase_Mn_BS	InterPro:Ureohydrolase_dom_sf	TIGR:cd11593
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:24099685..24102946

Molecular Weight (calculated)

45360.5 Da

IEP (calculated)

6.442

GRAVY (calculated)

-0.128

Length

416 amino acids

Sequence
(BLAST)

001: MHLVYCAECF AISEHLKGHM NLLVEKQVSC TSLAWHFVTS LPSFLSSPQP LRSLAFSRRL RLLLQSSVPP LDDSSAMGGA AAATGAARWI QRLSAARIST
101: EALERGQSRV IDASLTLIRE RAKLKGELLR AMGGVKASAT LLGVPLGHNS SFLQGPAFAP PRIREAIWCG STNSSTEEGK ELNDPRVLTD VGDVPIQEIR
201: DCGVEDDRLM HVISESVKTV MDEDPLRPLV LGGDHSISYP VVRAVSEKLG GPVDILHLDA HPDIYDCFEG NTYSHASSFA RIMEGGYARR LLQVGLRSIT
301: KEGREQGKRF GVEQYEMRTF SRDREKLENL KLGEGVKGVY VSVDVDCLDP AFAPGVSHIE PGGLSFRDVL NILQNLQGDV VAGDVVEFNP QRDTVDGMTA
401: MVAAKLVREL SAKISK

Best Arabidopsis Sequence Match ( AT4G08900.1 )
(BLAST)

001: MSRIIGRKGI NYIHRLNSAS FTSVSASSIE KGQNRVIDAS LTLIRERAKL KGELVRLLGG AKASTSLLGV PLGHNSSFLQ GPAFAPPRIR EAIWCGSTNS
101: ATEEGKELKD PRVLTDVGDV PVQEIRDCGV DDDRLMNVIS ESVKLVMEEE PLRPLVLGGD HSISYPVVRA VSEKLGGPVD ILHLDAHPDI YDCFEGNKYS
201: HASSFARIME GGYARRLLQV GIRSINQEGR EQGKRFGVEQ YEMRTFSKDR PMLENLKLGE GVKGVYISID VDCLDPAFAP GVSHIEPGGL SFRDVLNILH
301: NLQADVVGAD VVEFNPQRDT VDGMTAMVAA KLVRELAAKI SK

Arabidopsis Description

ARGAH1Arginase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46637]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.