CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76207	Soybean	cytosol, extracellular	59.17	78.43
HORVU2Hr1G005320.1	Barley	plastid	65.98	78.25
KRH03979	Soybean	mitochondrion	76.04	76.04
KRH76217	Soybean	mitochondrion	75.74	75.74
AT4G08870.1	Thale cress	mitochondrion	76.63	75.29
CDX90700	Canola	mitochondrion	75.15	74.27
Solyc01g091170.2.1	Tomato	plastid	74.26	74.26
Bra000659.1-P	Field mustard	mitochondrion	74.85	74.19
Solyc01g091160.2.1	Tomato	plastid	73.96	73.96
CDY05032	Canola	mitochondrion	74.56	73.9
Os04t0106300-01	Rice	mitochondrion	74.26	73.82
GSMUA_Achr5P14460_001	Banana	plastid	71.3	73.03
TraesCS2D01G034900.1	Wheat	mitochondrion	73.08	72.65
EES10350	Sorghum	mitochondrion	72.78	72.35
TraesCS2A01G035700.1	Wheat	mitochondrion	70.12	70.75
Zm00001d024908_P003	Maize	mitochondrion	72.19	66.48
VIT_15s0048g00420.t01	Wine grape	cytosol, mitochondrion, plastid	72.49	66.04
TraesCS2B01G048700.1	Wheat	cytosol	73.08	59.38

Protein Annotations

Gene3D:3.40.800.10	MapMan:4.2.1.1	UniProt:A0A0R0KEL3	EMBL:ACUP02001328	EnsemblPlantsGene:GLYMA_03G0280002	GO:GO:0000050
GO:GO:0003674	GO:GO:0003824	GO:GO:0004053	GO:GO:0005488	GO:GO:0006525	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0046872	InterPro:IPR006035
EnsemblPlants:KRH65329	ProteinID:KRH65329	ProteinID:KRH65329.1	PFAM:PF00491	PIRSF:PIRSF036979	PFscan:PS51409
PANTHER:PTHR11358	PANTHER:PTHR11358:SF32	SUPFAM:SSF52768	UniParc:UPI0006ED6D7B	InterPro:Ureohydrolase	InterPro:Ureohydrolase_dom_sf

Description

hypothetical protein

Coordinates

chr3:-:3070089..3075378

Molecular Weight (calculated)

37284.8 Da

IEP (calculated)

6.064

GRAVY (calculated)

-0.257

Length

338 amino acids

Sequence
(BLAST)

001: ISKVGRRGIH CMQKLCAEKI SPDSLEKAQN RVIDAALTLV RENTRLKKEL VHSLGGAVAT STLLGVPLGH NSSFLEGPAF APPFIREGIW CGSANSTTEE
101: GKDLKDLRIM VDVGDIPIQE MRDCGIGDER LMKVVSDSVK LVMEEDPLRP LILAGDHSIS YPVVRAISEK LGGPVDVLHF DAHPDLYDEF EGNYYSHASS
201: FARIMEGGYA RRLLQVGIRS INKEGREQAK KFGVEQFEMR HFSKDRPFLE NLNLGEGAKG VYISIDVDCL DPGYAVGVSH YESGGLSFRD VMNMLQNLKG
301: DIVGGDVVEY NPQRDTPDRM TAMVAAKFVR ELAAKMSK

Best Arabidopsis Sequence Match ( AT4G08870.1 )
(BLAST)

001: MWKIGQRGVP YFQRLIAAPF TTLRSLPTSL VETGQNRVID ASLTLIRERA KLKGELVRLI GGAKATTALL GVPLGHNSSF LEGPALAPPH VREAIWCGST
101: NSTTEEGKEL KDPRVLSDVG DIPVQEIREM GVDDDRLMKV VSESVKLVME EEPLRPLVIG GDHSISYPVV RAVSEKLGGP VDILHLDAHP DIYDRFEGNY
201: YSHASSFARI MEGGYARRLL QVGIRSINKE GREQGKRFGV EQYEMRTFSK DRQMLENLKL GEGVKGVYIS IDVDCLDPGF AHGVSHFEPG GLSFRDVLNI
301: LHNLQGDLVG ADVVEYNPQR DTADDMTAMV AAKFVRELAA KMSK

Arabidopsis Description

ARGAH2ARGAH2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1K8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.