CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 5

Predictors

GFP

MS/MS

Papers

mitochondrion: 27780359

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03979	Soybean	mitochondrion	97.63	97.63
HORVU2Hr1G005320.1	Barley	plastid	73.37	87.02
GSMUA_Achr5P14460_001	Banana	plastid	84.62	86.67
Bra000659.1-P	Field mustard	mitochondrion	86.09	85.34
CDY05032	Canola	mitochondrion	85.8	85.04
CDX90700	Canola	mitochondrion	85.8	84.8
Os04t0106300-01	Rice	mitochondrion	85.21	84.71
TraesCS2D01G034900.1	Wheat	mitochondrion	83.43	82.94
Solyc01g091160.2.1	Tomato	plastid	82.84	82.84
EES10350	Sorghum	mitochondrion	82.54	82.06
TraesCS2A01G035700.1	Wheat	mitochondrion	80.77	81.49
Solyc01g091170.2.1	Tomato	plastid	79.29	79.29
VIT_15s0048g00420.t01	Wine grape	cytosol, mitochondrion, plastid	85.5	77.9
Zm00001d024908_P003	Maize	mitochondrion	82.25	75.75
KRH65329	Soybean	cytosol, nucleus	75.74	75.74
TraesCS2B01G048700.1	Wheat	cytosol	83.43	67.79
KRH76207	Soybean	cytosol, extracellular	49.11	65.1

Protein Annotations

EntrezGene:100789799	Gene3D:3.40.800.10	MapMan:4.2.1.1	EMBL:ACUP02000582	EnsemblPlantsGene:GLYMA_01G140200	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0016787	GO:GO:0016813	GO:GO:0046872	InterPro:IPR006035
UniProt:K7K3R6	EnsemblPlants:KRH76217	ProteinID:KRH76217	ProteinID:KRH76217.1	PFAM:PF00491	PIRSF:PIRSF036979
ScanProsite:PS01053	PFscan:PS51409	PANTHER:PTHR11358	PANTHER:PTHR11358:SF32	SUPFAM:SSF52768	UniParc:UPI00023376E9
InterPro:Ureohydrolase	InterPro:Ureohydrolase_Mn_BS	InterPro:Ureohydrolase_dom_sf	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:46824992..46840883

Molecular Weight (calculated)

36826.3 Da

IEP (calculated)

6.355

GRAVY (calculated)

-0.123

Length

338 amino acids

Sequence
(BLAST)

001: MSIISRRGIC YMPRLDAAKV SAALLEKGQN RVIDASLTLI RERAKLKGEL VRALGGAKAT STLLGVPLGH NSSFLQGPAF APPRIREAIW CGSTNSTTEE
101: GKELQDARVL TDVGDVPIQE IRDCGVDDHR LMNVIGESVK LVMEEDPLRP LVLGGDHSIS FPVIRAVSEK HGGPVDVLHL DAHPDNYDAF EGNIYSHASS
201: FARVMEGDYV RRLLQVGIRS ITAEGRAQAK KFGVEQYEMR TFSRDRHFLE NLKLGEGVKG VYISIDVDCL DPAFAPGVSH IEPGGLSFRD VLNILHNLQG
301: DVIAGDVVEL NPQRDTVDGM TAMVAAKLVR ELAAKISK

Best Arabidopsis Sequence Match ( AT4G08900.1 )
(BLAST)

001: MSRIIGRKGI NYIHRLNSAS FTSVSASSIE KGQNRVIDAS LTLIRERAKL KGELVRLLGG AKASTSLLGV PLGHNSSFLQ GPAFAPPRIR EAIWCGSTNS
101: ATEEGKELKD PRVLTDVGDV PVQEIRDCGV DDDRLMNVIS ESVKLVMEEE PLRPLVLGGD HSISYPVVRA VSEKLGGPVD ILHLDAHPDI YDCFEGNKYS
201: HASSFARIME GGYARRLLQV GIRSINQEGR EQGKRFGVEQ YEMRTFSKDR PMLENLKLGE GVKGVYISID VDCLDPAFAP GVSHIEPGGL SFRDVLNILH
301: NLQADVVGAD VVEFNPQRDT VDGMTAMVAA KLVRELAAKI SK

Arabidopsis Description

ARGAH1Arginase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46637]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.