CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65329	Soybean	cytosol, nucleus	78.43	59.17
HORVU2Hr1G005320.1	Barley	plastid	61.57	55.09
Solyc01g091170.2.1	Tomato	plastid	67.06	50.59
AT4G08870.1	Thale cress	mitochondrion	67.84	50.29
KRH03979	Soybean	mitochondrion	65.88	49.7
GSMUA_Achr5P14460_001	Banana	plastid	63.92	49.39
KRH76217	Soybean	mitochondrion	65.1	49.11
Bra000659.1-P	Field mustard	mitochondrion	65.49	48.97
CDX90700	Canola	mitochondrion	65.49	48.83
Solyc01g091160.2.1	Tomato	plastid	64.71	48.82
CDY05032	Canola	mitochondrion	65.1	48.68
Os04t0106300-01	Rice	mitochondrion	64.71	48.53
TraesCS2A01G035700.1	Wheat	mitochondrion	62.75	47.76
EES10350	Sorghum	mitochondrion	63.53	47.65
TraesCS2D01G034900.1	Wheat	mitochondrion	63.53	47.65
Zm00001d024908_P003	Maize	mitochondrion	63.14	43.87
VIT_15s0048g00420.t01	Wine grape	cytosol, mitochondrion, plastid	62.35	42.86
TraesCS2B01G048700.1	Wheat	cytosol	63.53	38.94

Protein Annotations

EMBL:ACUP02000582	EnsemblPlants:KRH76207	EnsemblPlantsGene:GLYMA_01G139300	Gene3D:3.40.800.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0046872	InterPro:IPR006035	InterPro:Ureohydrolase	InterPro:Ureohydrolase_dom_sf	PANTHER:PTHR11358	PANTHER:PTHR11358:SF32
PFAM:PF00491	PFscan:PS51409	PIRSF:PIRSF036979	ProteinID:KRH76207	ProteinID:KRH76207.1	SUPFAM:SSF52768
UniParc:UPI0006ED7C75	UniProt:A0A0R0LJU1	MapMan:4.2.1.1	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:46703517..46706722

Molecular Weight (calculated)

28422.3 Da

IEP (calculated)

4.931

GRAVY (calculated)

-0.162

Length

255 amino acids

Sequence
(BLAST)

001: MLMDFVKSLS LFGEKALVEW MKELIYCLGG AVATSTLLGV PLGHNSLFRE GPSFAPPFIW EGIWCGSANS TTEEGKDLKD LRIMADVGDI PIQEIDERGK
101: LLIFVRAIPE NLGGPVDVLR FDAHPDLYDK FEGKYYSRAS SFARIMEGGY ICSLTLVDIR SINKEGREQA KKFGIKQYEM RHFSKDRPFL ENLKLGEGVK
201: GVYISIDVDC LDPGYAVGVS HYESGGDIVG GDMIEYNPQR DTPDRMIAMV AKMSK

Best Arabidopsis Sequence Match ( AT4G08870.1 )
(BLAST)

001: MWKIGQRGVP YFQRLIAAPF TTLRSLPTSL VETGQNRVID ASLTLIRERA KLKGELVRLI GGAKATTALL GVPLGHNSSF LEGPALAPPH VREAIWCGST
101: NSTTEEGKEL KDPRVLSDVG DIPVQEIREM GVDDDRLMKV VSESVKLVME EEPLRPLVIG GDHSISYPVV RAVSEKLGGP VDILHLDAHP DIYDRFEGNY
201: YSHASSFARI MEGGYARRLL QVGIRSINKE GREQGKRFGV EQYEMRTFSK DRQMLENLKL GEGVKGVYIS IDVDCLDPGF AHGVSHFEPG GLSFRDVLNI
301: LHNLQGDLVG ADVVEYNPQR DTADDMTAMV AAKFVRELAA KMSK

Arabidopsis Description

ARGAH2ARGAH2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1K8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.