Factsheet for VIT_15s0048g00420.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P14460_001	Banana	plastid	81.4	91.52
HORVU2Hr1G005320.1	Barley	plastid	68.73	89.47
Solyc01g091160.2.1	Tomato	plastid	81.4	89.35
EES10350	Sorghum	mitochondrion	78.98	86.18
Bra000659.1-P	Field mustard	mitochondrion	78.98	85.92
CDY05032	Canola	mitochondrion	78.71	85.63
KRH76217	Soybean	mitochondrion	77.9	85.5
CDX90700	Canola	mitochondrion	78.71	85.38
KRH03979	Soybean	mitochondrion	77.63	85.21
Os04t0106300-01	Rice	mitochondrion	77.9	85.0
TraesCS2D01G034900.1	Wheat	mitochondrion	77.36	84.41
Solyc01g091170.2.1	Tomato	plastid	76.01	83.43
TraesCS2A01G035700.1	Wheat	mitochondrion	75.2	83.28
AT4G08870.1	Thale cress	mitochondrion	74.93	80.81
Zm00001d024908_P003	Maize	mitochondrion	78.71	79.56
KRH65329	Soybean	cytosol, nucleus	66.04	72.49
TraesCS2B01G048700.1	Wheat	cytosol	78.17	69.71
KRH76207	Soybean	cytosol, extracellular	42.86	62.35

Protein Annotations

EntrezGene:100245397	wikigene:100245397	Gene3D:3.40.800.10	MapMan:4.2.1.1	ProteinID:CBI38896	ProteinID:CBI38896.3
UniProt:D7U7W7	EMBL:FN596739	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0016787
GO:GO:0016813	GO:GO:0046872	InterPro:IPR006035	EntrezGene:LOC100245397	wikigene:LOC100245397	PFAM:PF00491
PIRSF:PIRSF036979	ScanProsite:PS01053	PFscan:PS51409	PANTHER:PTHR11358	PANTHER:PTHR11358:SF32	SUPFAM:SSF52768
TIGR:TC52415	UniParc:UPI0001BE50E1	InterPro:Ureohydrolase	InterPro:Ureohydrolase_Mn_BS	InterPro:Ureohydrolase_dom_sf	ArrayExpress:VIT_15s0048g00420
EnsemblPlantsGene:VIT_15s0048g00420	EnsemblPlants:VIT_15s0048g00420.t01	unigene:Vvi.2333	RefSeq:XP_002280690	RefSeq:XP_002280690.2	SEG:seg

Description

No Description!

Coordinates

chr15:-:14534672..14540177

Molecular Weight (calculated)

40747.9 Da

IEP (calculated)

6.709

GRAVY (calculated)

-0.215

Length

371 amino acids

Sequence
(BLAST)

001: MVSFINSHQS IEHRSGSITN QAHTGNFFLG MRNIARKGIH YWQKLNAANV PAELIENGQN RVIDASLTLI RERAKLKGEL VRALGGALAS SSLLGVPLGH
101: NSSFLQGPAF APPRIREAIW CGSTNATTEE GKELNDPRVL TDVGDVPVQE IRDCGVDDDR LMKIISESVK LVMEEDPLRP LVLGGDHSIS FPVVRAVSEK
201: IGGPVDILHL DAHPDIYHSF EGNKYSHASP FARIMEGGYA RRLLQVGLRS ITSEGREQGK RFGVEQYEMR TFSRDRHILE NLKLGEGVKG VYISLDVDCL
301: DPAFAPGVSH IEPGGLSFRD VLNILHNLQA DVVAADVVEF NPQRDTVDGM TAMVAAKLVR ELTAKMSKMK N

Best Arabidopsis Sequence Match ( AT4G08900.1 )
(BLAST)

001: MSRIIGRKGI NYIHRLNSAS FTSVSASSIE KGQNRVIDAS LTLIRERAKL KGELVRLLGG AKASTSLLGV PLGHNSSFLQ GPAFAPPRIR EAIWCGSTNS
101: ATEEGKELKD PRVLTDVGDV PVQEIRDCGV DDDRLMNVIS ESVKLVMEEE PLRPLVLGGD HSISYPVVRA VSEKLGGPVD ILHLDAHPDI YDCFEGNKYS
201: HASSFARIME GGYARRLLQV GIRSINQEGR EQGKRFGVEQ YEMRTFSKDR PMLENLKLGE GVKGVYISID VDCLDPAFAP GVSHIEPGGL SFRDVLNILH
301: NLQADVVGAD VVEFNPQRDT VDGMTAMVAA KLVRELAAKI SK

Arabidopsis Description

ARGAH1Arginase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46637]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.