Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024347.1-P | Field mustard | cytosol | 90.95 | 90.95 |
| AT5G65030.1 | Thale cress | mitochondrion, nucleus | 77.39 | 76.24 |
| CDX69854 | Canola | cytosol, nucleus, plastid | 60.8 | 62.69 |
| CDX96983 | Canola | cytosol | 60.3 | 62.18 |
| PGSC0003DMT400056116 | Potato | cytosol | 35.18 | 35.9 |
| PGSC0003DMT400004772 | Potato | cytosol | 35.68 | 34.63 |
| KRG97587 | Soybean | nucleus | 33.67 | 34.01 |
| Solyc04g055130.1.1 | Tomato | nucleus | 21.11 | 32.81 |
| PGSC0003DMT400004773 | Potato | cytosol | 20.1 | 32.52 |
| KRH31287 | Soybean | cytosol | 31.66 | 31.5 |
| Solyc03g078620.1.1 | Tomato | cytosol | 31.66 | 31.19 |
| PGSC0003DMT400004770 | Potato | cytosol | 20.6 | 30.83 |
| Solyc04g055140.1.1 | Tomato | cytosol | 20.6 | 30.37 |
| PGSC0003DMT400004769 | Potato | cytosol | 12.06 | 30.0 |
| Solyc04g055150.1.1 | Tomato | nucleus | 20.1 | 29.63 |
Protein Annotations
| EnsemblPlants:CDY14531 | EnsemblPlantsGene:GSBRNA2T00079246001 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR35503 | PANTHER:PTHR35503:SF2 | PFAM:PF00168 | ProteinID:CDY14531 | ProteinID:CDY14531.1 |
| SEG:seg | UniParc:UPI0004EF2182 | UniProt:A0A078FN92 | MapMan:35.2 | : | : |
Description
BnaC03g49280DBnaC03g49280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FN92]
Coordinates
chrLK032044:-:239342..239941
Molecular Weight (calculated)
22512.5 Da
IEP (calculated)
8.349
GRAVY (calculated)
-0.211
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVMGKKLSS LKCQVRVIEA RNVEIKSQAS TLFVKFYLSA GHNRKIEVNT RELCQKSENL IWDQSFGLEC QGNEEAVEEL KQQRVLFELR RRKTASFLRK
101: SSRSEVVGRG EVSWESVFES RGMEMERFVV MIESKTPVFG DGSPVLLKIG LKVQALEMEK KMLINKKEKL CACCSSRDCG SCSCLDYEAF ALACALDCI
101: SSRSEVVGRG EVSWESVFES RGMEMERFVV MIESKTPVFG DGSPVLLKIG LKVQALEMEK KMLINKKEKL CACCSSRDCG SCSCLDYEAF ALACALDCI
001: MGVMEKKLRS LKCQVRIVEA RNVEIKSQAS TLFVRFYLSA GHNRKIEVNT RELSSKSDQL MWDQSFGLEC QGDEAAVKEL KQQRVVFELR RKKISTFLRK
101: SSKSEVVGRG EVSWESVFES PGMEIERLVV MGESKNWVLE DERPLLLKIA LKVQALEEME KMLIKNDKKT EKLCCVCSSR DCGSCSCLDY EAFALVCALD
201: CI
101: SSKSEVVGRG EVSWESVFES PGMEIERLVV MGESKNWVLE DERPLLLKIA LKVQALEEME KMLIKNDKKT EKLCCVCSSR DCGSCSCLDY EAFALVCALD
201: CI
Arabidopsis Description
At5g65030 [Source:UniProtKB/TrEMBL;Acc:Q9LV76]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.