Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 6
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029056_P002 | Maize | extracellular, plasma membrane, vacuole | 95.55 | 96.01 |
| Zm00001d047522_P002 | Maize | extracellular, plasma membrane, vacuole | 95.07 | 91.44 |
| Os03t0335300-01 | Rice | plasma membrane | 84.9 | 85.03 |
| TraesCS4B01G170000.1 | Wheat | plasma membrane | 83.78 | 84.46 |
| TraesCS4D01G172100.1 | Wheat | golgi | 83.62 | 84.29 |
| TraesCS4A01G135100.3 | Wheat | plasma membrane | 83.78 | 79.13 |
| GSMUA_Achr7P22040_001 | Banana | extracellular, plasma membrane | 74.09 | 74.92 |
| EES09132 | Sorghum | plasma membrane | 73.93 | 74.16 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, plasma membrane | 73.13 | 74.07 |
| EER99915 | Sorghum | plasma membrane | 74.72 | 73.9 |
| HORVU4Hr1G050280.9 | Barley | plastid | 75.04 | 71.95 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi, plasma membrane | 59.62 | 70.89 |
| KXG27024 | Sorghum | plasma membrane | 55.33 | 56.86 |
| KXG20551 | Sorghum | plasma membrane, plastid | 58.03 | 48.47 |
Protein Annotations
| MapMan:18.10.1.4 | Gene3D:2.10.25.10 | MapMan:22.5.2.1 | Gene3D:3.40.30.10 | Gene3D:3.50.30.30 | EntrezGene:8082338 |
| UniProt:C5X0T6 | EnsemblPlants:EER94904 | ProteinID:EER94904 | ProteinID:EER94904.1 | InterPro:EGF-like_Ca-bd_dom | InterPro:EGF_Ca-bd_CS |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PA_domain | PFAM:PF02225 | ScanProsite:PS01187 | PANTHER:PTHR22765 | PANTHER:PTHR22765:SF47 | SMART:SM00179 |
| EnsemblPlantsGene:SORBI_3001G381200 | SUPFAM:SSF52025 | unigene:Sbi.3747 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001A82DEF |
| RefSeq:XP_002467906.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:66898592..66906265
Molecular Weight (calculated)
70285.1 Da
IEP (calculated)
4.947
GRAVY (calculated)
-0.407
Length
629 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRGQAWLAL LLVVALALAD AAAGRFVVEK NSIQVTSPDE LKGKYECAIG NFGVPQYGGT LHGWVEYPKS NRKACQSFDQ FDISFKPKQA GGRPTFVLVD
101: RGECFFTTKA WNAQNAGAAA VLVVDDKSEP LITMDNPEEG KEHLENITIP SVLITKKLGE SLKKSVENGD MLSVLLDWRE SLPHPDERVE YEFWTNSNDE
201: CGPKCDMQMD FVRSFRGTAQ ILEKKGYTQF TPHYITWYCP EAFVSSKQCK SQCINHGRYC APDPEQDFSQ GYDGRDVVVQ NLHQICVFKI ANETGKPWLW
301: WDYVHDFALR CPMKDKKYNH DCASDVIKSL GLEMEKINKC IGDPEADVEN EILKAEQDAQ IGHGNRGDVT ILPTLVINNR QYRGTLDKVA VMKAICSGFE
401: ETTEPAVCLS EEVQTNECLE NNGGCWLDTA NNVTACKDTF RGRVCECPIV RGVKFVGDGY THCEASGIGR CEINNGGCWQ ETKDGKTISA CSNEVSEGCK
501: CPVGFKGDGE KSCEDIDECK DKLYCQCKGC SCKNTWGSYE CSCGDDNMLY MREHDTCISK KGTTSTVGWS FLWVIFFGLV FAGVGAYAVY KYRLRSYMDS
601: EIRAIMAQYM PLDNQEGANQ HQVVHANDI
101: RGECFFTTKA WNAQNAGAAA VLVVDDKSEP LITMDNPEEG KEHLENITIP SVLITKKLGE SLKKSVENGD MLSVLLDWRE SLPHPDERVE YEFWTNSNDE
201: CGPKCDMQMD FVRSFRGTAQ ILEKKGYTQF TPHYITWYCP EAFVSSKQCK SQCINHGRYC APDPEQDFSQ GYDGRDVVVQ NLHQICVFKI ANETGKPWLW
301: WDYVHDFALR CPMKDKKYNH DCASDVIKSL GLEMEKINKC IGDPEADVEN EILKAEQDAQ IGHGNRGDVT ILPTLVINNR QYRGTLDKVA VMKAICSGFE
401: ETTEPAVCLS EEVQTNECLE NNGGCWLDTA NNVTACKDTF RGRVCECPIV RGVKFVGDGY THCEASGIGR CEINNGGCWQ ETKDGKTISA CSNEVSEGCK
501: CPVGFKGDGE KSCEDIDECK DKLYCQCKGC SCKNTWGSYE CSCGDDNMLY MREHDTCISK KGTTSTVGWS FLWVIFFGLV FAGVGAYAVY KYRLRSYMDS
601: EIRAIMAQYM PLDNQEGANQ HQVVHANDI
001: MKLGLFTLSF LLILNLAMGR FVVEKNNLKV TSPDSIKGIY ECAIGNFGVP QYGGTLVGTV VYPKSNQKAC KSYSDFDISF KSKPGRLPTF VLIDRGDCYF
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI
Arabidopsis Description
VSR1Vacuolar-sorting receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P93026]
SUBAcon: [plasma membrane,golgi,extracellular]
SUBAcon: [plasma membrane,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.