Factsheet for Zm00001d047522_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029056_P002	Maize	extracellular, plasma membrane, vacuole	91.74	95.85
EER94904	Sorghum	extracellular, plasma membrane, vacuole	91.44	95.07
Os03t0335300-01	Rice	plasma membrane	82.11	85.51
TraesCS4B01G170000.1	Wheat	plasma membrane	80.28	84.13
TraesCS4D01G172100.1	Wheat	golgi	80.28	84.13
TraesCS4A01G135100.3	Wheat	plasma membrane	79.97	78.53
GSMUA_Achr7P22040_001	Banana	extracellular, plasma membrane	70.95	74.6
Zm00001d005062_P003	Maize	plasma membrane	70.64	74.04
Zm00001d022439_P001	Maize	extracellular, plasma membrane, vacuole	71.41	73.78
GSMUA_Achr11P...	Banana	extracellular, golgi, plasma membrane	70.03	73.75
Zm00001d052354_P005	Maize	plasma membrane	69.42	72.87
HORVU4Hr1G050280.9	Barley	plastid	71.71	71.49
GSMUA_AchrUn_...	Banana	extracellular, golgi, plasma membrane	57.03	70.51
Zm00001d012390_P001	Maize	cytosol	9.63	70.0
Zm00001d004678_P001	Maize	cytosol, nucleus, plastid	10.4	67.33
Zm00001d014302_P003	Maize	plasma membrane	59.02	62.46
Zm00001d014303_P002	Maize	plasma membrane	56.12	59.29
Zm00001d046945_P001	Maize	plasma membrane	54.74	56.92
Zm00001d005060_P001	Maize	extracellular	9.17	55.05
Zm00001d053767_P001	Maize	mitochondrion	9.48	44.29

Protein Annotations

Gene3D:2.10.25.10	MapMan:22.5.2.1	Gene3D:3.40.30.10	Gene3D:3.50.30.30	EntrezGene:542350	UniProt:A0A1D6PAX3
ProteinID:AQL06831.1	InterPro:EGF-like_Ca-bd_dom	InterPro:EGF_Ca-bd_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:PA_domain	PFAM:PF02225	ScanProsite:PS01187
PANTHER:PTHR22765	PANTHER:PTHR22765:SF47	SMART:SM00179	SUPFAM:SSF52025	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000844A460	EnsemblPlantsGene:Zm00001d047522	EnsemblPlants:Zm00001d047522_P002	EnsemblPlants:Zm00001d047522_T002	SEG:seg	:

Description

vacuolar sorting receptor homolog1Vacuolar-sorting receptor 1

Coordinates

chr9:-:133460977..133469214

Molecular Weight (calculated)

73452.1 Da

IEP (calculated)

5.071

GRAVY (calculated)

-0.393

Length

654 amino acids

Sequence
(BLAST)

001: MMRGQAWLAL LVVVALALAD AAAGRFVVEK NSLEVTSPDE LKGKYECAIG NFGVPQYGGT LHGWVEYPKS NRKACQSFDQ FDISFKPKQA GGRPIFVLVD
101: RGECFFTTKA WNAQNAGAAA VLVVDDKSEP LITMDNPEEG KEHLENITIP SVLITKKLGE NLKKSAENGD MLSVLLDWRE SLPHPDERVE YEFWTNSNDE
201: CGPKCDMQMD FVRSFRGTAQ ILEKKGYTQF TPHYITWYCP EAFVDSKQCK SQCINHGRYC APDPDQDFSQ GYDGRNVVVQ NLHQICVFKI ANETGKPWLW
301: WDYVHDFALR CPMKDKKYNN DCAHDVIKSL GLDIENINKC VGDPEADVEN EILKAEQDAQ IGHGKRGDVT ILPTLVINNK QYRGKLDKVA VLKAICSGFE
401: ETTEPAICLS EEIQTNECLE NNGGCWLDKA NNVTACKVRR SNCIYMRMQD TFRGRVCECP IVRGVKFVGD GYTHCEASGV GRCEISNGGC WQETKDGKTI
501: SACSFVYIVK TKFEVLQNEI SEGCKCPMGF KGDGEKSCED IDECQEKLYC QCKGCSCKNT WGSYECSCGD DNMLYMREHD TCISKEGTAT TVGWSFLWVI
601: FFGLVFAGVG AYAVYKYRLR SYMDSEIRAI MAQYMPLDNQ EGANQHQVVH ANDI

Best Arabidopsis Sequence Match ( AT2G14720.1 )
(BLAST)

001: MKQLLCYLPW LLLLSLVVSP FNEARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKDCAESVIK SLGIDSRKID KCMGDPDADL DNPVLKEEQD AQVGKGTRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEESTEPAIC LSTDMETNEC LDNNGGCWQD KSANITACKD TFRGKVCVCP IVDGVRFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GVKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YMRDHDTCIS KTGSQVKSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEVP NHTNDERA

Arabidopsis Description

VSR4Vacuolar-sorting receptor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q56ZQ3]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.