Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G170000.1 | Wheat | plasma membrane | 82.32 | 86.54 |
| TraesCS4D01G172100.1 | Wheat | golgi | 82.16 | 86.38 |
| TraesCS4A01G135100.3 | Wheat | plasma membrane | 82.01 | 80.78 |
| Os03t0335300-01 | Rice | plasma membrane | 72.41 | 75.64 |
| Zm00001d029056_P002 | Maize | extracellular, plasma membrane, vacuole | 71.95 | 75.4 |
| EER94904 | Sorghum | extracellular, plasma membrane, vacuole | 71.95 | 75.04 |
| Zm00001d047522_P002 | Maize | extracellular, plasma membrane, vacuole | 71.49 | 71.71 |
| HORVU5Hr1G046490.2 | Barley | cytosol | 58.23 | 67.85 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, plasma membrane | 62.96 | 66.51 |
| HORVU4Hr1G022950.10 | Barley | extracellular | 63.11 | 66.24 |
| GSMUA_Achr7P22040_001 | Banana | extracellular, plasma membrane | 62.2 | 65.59 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi, plasma membrane | 50.61 | 62.76 |
| HORVU1Hr1G032780.9 | Barley | extracellular | 56.25 | 58.02 |
| HORVU2Hr1G017770.3 | Barley | plastid | 69.05 | 54.38 |
| HORVU7Hr1G109180.2 | Barley | mitochondrion, plasma membrane, vacuole | 50.0 | 50.0 |
| HORVU2Hr1G099640.3 | Barley | extracellular | 14.94 | 15.24 |
| HORVU5Hr1G046470.1 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.10.25.10 | MapMan:22.5.2.1 | Gene3D:3.40.30.10 | Gene3D:3.50.30.30 | UniProt:A0A287P0V3 | InterPro:EGF-like_Ca-bd_dom |
| InterPro:EGF_Ca-bd_CS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlantsGene:HORVU4Hr1G050280 | EnsemblPlants:HORVU4Hr1G050280.9 | InterPro:PA_domain | PFAM:PF02225 | ScanProsite:PS01187 |
| PANTHER:PTHR22765 | PANTHER:PTHR22765:SF47 | SMART:SM00179 | SUPFAM:SSF52025 | TMHMM:TMhelix | UniParc:UPI000B47D757 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:409424954..409432459
Molecular Weight (calculated)
72907.6 Da
IEP (calculated)
6.773
GRAVY (calculated)
-0.463
Length
656 amino acids
Sequence
(BLAST)
(BLAST)
001: NNQQPTTRRL HTRSRGRALL PSKQVQPLPP SVPPSIRSTR AFASLDLAAR LDLFSRPLSV ARSADLRLPW EPPSLPSKDP NLFLLLRSGF VRIVRRGSRM
101: MGPAPSWWAV LLLVLLAMAD AVAGRFVVEK NSVQVTSPEN LKGKYECAIG NFGLPQYGGT LQGWVVYPKD NRQACKEFDV SFKGHKSGAR PNFVLIDRGE
201: CFFTTKAWNA QLAGAAAILV VDSKDEPLIT MDNPEDTGTK HLENITIPSV LITKKLGEDL KKSAENGDMV SVLLDWRESL PHPDERVEYE FWTNSNDECG
301: PKCDMQMDFV KSFRGTAQVL EQKGYTQFTP HYITWYCPEA FTVSKQCKSQ CINHGRYCAP DPEQDFSKGY DGKDVVVQNL HQVCVFKVAN DTGKPWLWWD
401: YVHDFAIRCP MKEKKYTHDC ASHVIKSLGL DMEKINKCVG DPEADEENPI LKAEQDAQIG HGKRGDVTIL PTLVVNNRQY RGKLDKGAVL KAICSGFEET
501: TEPAICLSED VQTNECLENH GGCWVDKANN VTACKDTFRG RVCECPIVKG VKFVGDGYTN CEASGVGRCE INNGGCWKET KNGKTISACS HEESEGCKCP
601: QGFKGDGVKS CEDIDECKTK SACQCNGCSC ENTWGSYECS CGSSNMLYMR EQDTCI
101: MGPAPSWWAV LLLVLLAMAD AVAGRFVVEK NSVQVTSPEN LKGKYECAIG NFGLPQYGGT LQGWVVYPKD NRQACKEFDV SFKGHKSGAR PNFVLIDRGE
201: CFFTTKAWNA QLAGAAAILV VDSKDEPLIT MDNPEDTGTK HLENITIPSV LITKKLGEDL KKSAENGDMV SVLLDWRESL PHPDERVEYE FWTNSNDECG
301: PKCDMQMDFV KSFRGTAQVL EQKGYTQFTP HYITWYCPEA FTVSKQCKSQ CINHGRYCAP DPEQDFSKGY DGKDVVVQNL HQVCVFKVAN DTGKPWLWWD
401: YVHDFAIRCP MKEKKYTHDC ASHVIKSLGL DMEKINKCVG DPEADEENPI LKAEQDAQIG HGKRGDVTIL PTLVVNNRQY RGKLDKGAVL KAICSGFEET
501: TEPAICLSED VQTNECLENH GGCWVDKANN VTACKDTFRG RVCECPIVKG VKFVGDGYTN CEASGVGRCE INNGGCWKET KNGKTISACS HEESEGCKCP
601: QGFKGDGVKS CEDIDECKTK SACQCNGCSC ENTWGSYECS CGSSNMLYMR EQDTCI
001: MKQLLCYLPW LLLLSLVVSP FNEARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKDCAESVIK SLGIDSRKID KCMGDPDADL DNPVLKEEQD AQVGKGTRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEESTEPAIC LSTDMETNEC LDNNGGCWQD KSANITACKD TFRGKVCVCP IVDGVRFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GVKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YMRDHDTCIS KTGSQVKSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEVP NHTNDERA
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKDCAESVIK SLGIDSRKID KCMGDPDADL DNPVLKEEQD AQVGKGTRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEESTEPAIC LSTDMETNEC LDNNGGCWQD KSANITACKD TFRGKVCVCP IVDGVRFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GVKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YMRDHDTCIS KTGSQVKSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEVP NHTNDERA
Arabidopsis Description
VSR4Vacuolar-sorting receptor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q56ZQ3]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.