Factsheet for HORVU2Hr1G099640.3

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	extracellular, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34940.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12449	Canola	cytosol	12.75	28.28
Bra039877.1-P	Field mustard	cytosol	11.51	22.42
TraesCS2A01G425800.2	Wheat	mitochondrion	22.08	22.15
TraesCS2B01G446100.1	Wheat	plasma membrane	22.08	22.12
TraesCS2D01G423700.1	Wheat	golgi	21.93	22.0
KXG27024	Sorghum	plasma membrane	19.13	20.1
Os04t0611400-01	Rice	plasma membrane	19.13	19.46
GSMUA_AchrUn_...	Banana	plasma membrane	17.11	18.71
HORVU5Hr1G046490.2	Barley	cytosol	16.33	18.65
VIT_01s0011g01050.t01	Wine grape	extracellular, plasma membrane, vacuole	17.88	18.25
PGSC0003DMT400018916	Potato	plasma membrane	17.57	18.08
KRH37180	Soybean	plasma membrane	17.42	17.95
KRH12166	Soybean	plasma membrane	17.42	17.83
Solyc02g081970.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	17.57	17.71
HORVU7Hr1G109180.2	Barley	mitochondrion, plasma membrane, vacuole	17.88	17.53
AT2G34940.1	Thale cress	plasma membrane	16.8	17.48
Bra023151.1-P	Field mustard	plasma membrane	16.95	17.33
CDY02347	Canola	plasma membrane	16.95	17.33
CDY43178	Canola	plasma membrane	16.95	17.33
AT1G30900.1	Thale cress	extracellular, plasma membrane, vacuole	16.95	17.27
AT4G20110.2	Thale cress	plasma membrane	16.8	17.2
CDX78975	Canola	plasma membrane	16.33	16.64
Bra021940.1-P	Field mustard	plasma membrane	16.17	16.59
CDY43647	Canola	plasma membrane	16.17	16.56
CDY64650	Canola	plasma membrane	16.17	16.56
CDY50060	Canola	plasma membrane	16.17	16.53
Bra013445.1-P	Field mustard	plasma membrane	16.17	16.48
HORVU4Hr1G022950.10	Barley	extracellular	15.71	16.16
HORVU1Hr1G032780.9	Barley	extracellular	15.4	15.57
HORVU4Hr1G050280.9	Barley	plastid	15.24	14.94
HORVU2Hr1G017770.3	Barley	plastid	15.71	12.12
GSMUA_Achr7P03630_001	Banana	plasma membrane	17.57	11.17
HORVU5Hr1G046470.1	Barley	cytosol, mitochondrion	0.31	3.45

Protein Annotations

EnsemblPlants:HORVU2Hr1G099640.3	EnsemblPlantsGene:HORVU2Hr1G099640	ncoils:Coil	PANTHER:PTHR22765	PANTHER:PTHR22765:SF90	SEG:seg
UniParc:UPI000B466380	UniProt:A0A287J5G2	MapMan:22.5.2.1	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:688034218..688037311

Molecular Weight (calculated)

25967.6 Da

IEP (calculated)

8.922

GRAVY (calculated)

-0.286

Length

643 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXQVGQ
401: GNRGDVTILP TLVINNVQYR GKLESTAVLK AICAGFKETT EPRVCMTQDM ETDECLHNNG GCWRDDKTNI TACKDTYRGR VCECPAVDGV QYEGDGYKEC
501: KPVGPGRCAA NNGGCWKETR HGKTFSACRG SESRLRVPXX XXXVRHGRGH LRGEERGGHG VAGDGAGALV PRRRRARRLR LLQVQAQAVH GLGSGGDHVA
601: VHASGGPEQH RRREPAAQGG GRRGSIDGQT ALGFQDGFPT NGE

Best Arabidopsis Sequence Match ( AT1G30900.1 )
(BLAST)

001: MSLIHKGATL ALFLALTMVV NGVFGRFIVE KSSVTILNPL AMRSKHDAAI ANFGVPNYGG YMIGSVVYAG QGAYGCDSFD KTFKPKFPRP TILIIDRGEC
101: YFALKVWNGQ QSGVAAVLVA DNVDEPLITM DSPEESKEAD DFIEKLNIPS ALIDFSFANT LKQALKKGEE VVLKIDWSES LPHPDERVEY ELWTNTNDEC
201: GARCDEQMNF VKNFKGHAQI LEKGGYSLFT PHYITWFCPK DYVSSNQCKS QCINQGRYCA PDPEQDFGDG YDGKDIVFEN LRQLCVHKVA KENNRSWVWW
301: DYVTDFHIRC SMKEKKYSKE CAERVVESLG LPLDKIKKCI GDPDANVENE VLKAEQALQV GQGDRGDVTI LPTLIVNNAQ YRGKLERNAV LKAICSGFKE
401: RTEPGICLSG DIETNECLEA NGGCWEDKKS NVTACKDTFR GRVCECPVVN GVQYKGDGYT SCEPYGPARC SINQGGCWSE TKKGLTFSAC SNLETSGCRC
501: PPGFKGDGLK CEDIDECKEQ SACQCDGCNC KNKWGGFECK CSGNRLYMKE QDTCIERSGS RIGWFPTFVI LAAVASICVG GYVFYKYRLR SYMDSEIMAI
601: MSQYMPLESQ NTTDPMTGES QHQQLRLTSA A

Arabidopsis Description

VSR6Vacuolar-sorting receptor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYH7]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.