Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 5
- plastid 1
- vacuole 4
- plasma membrane 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64650 | Canola | plasma membrane | 82.2 | 80.89 |
| CDY43647 | Canola | plasma membrane | 81.88 | 80.57 |
| Bra021940.1-P | Field mustard | plasma membrane | 81.39 | 80.22 |
| AT1G30900.1 | Thale cress | extracellular, plasma membrane, vacuole | 74.6 | 73.06 |
| AT4G20110.2 | Thale cress | plasma membrane | 63.11 | 62.1 |
| TraesCS7A01G281400.1 | Wheat | cytosol, nucleus, plastid | 9.71 | 60.61 |
| GSMUA_Achr3P23680_001 | Banana | plasma membrane | 53.56 | 58.79 |
| Os06t0664300-01 | Rice | plasma membrane | 60.52 | 58.71 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 55.34 | 58.16 |
| Zm00001d046945_P001 | Maize | plasma membrane | 57.44 | 56.44 |
| TraesCS7D01G471300.1 | Wheat | golgi | 57.44 | 56.35 |
| TraesCS7B01G387100.1 | Wheat | extracellular, plasma membrane | 57.44 | 56.35 |
| TraesCS7A01G483700.1 | Wheat | golgi, plasma membrane | 57.12 | 56.3 |
| AT2G14740.1 | Thale cress | extracellular, plasma membrane, vacuole | 56.96 | 56.05 |
| AT2G14720.1 | Thale cress | extracellular, plasma membrane, vacuole | 56.8 | 55.89 |
| AT3G52850.1 | Thale cress | extracellular, golgi, plasma membrane | 55.83 | 55.38 |
| KXG27024 | Sorghum | plasma membrane | 54.21 | 54.74 |
| Os04t0611400-01 | Rice | plasma membrane | 55.5 | 54.27 |
| TraesCS2B01G446100.1 | Wheat | plasma membrane | 56.31 | 54.21 |
| TraesCS2A01G425800.2 | Wheat | mitochondrion | 55.99 | 53.98 |
| HORVU7Hr1G109180.2 | Barley | mitochondrion, plasma membrane, vacuole | 57.12 | 53.81 |
| TraesCS2D01G423700.1 | Wheat | golgi | 55.66 | 53.67 |
| TraesCS7D01G145700.2 | Wheat | cytosol | 25.89 | 53.33 |
| AT2G30290.2 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 51.94 | 50.08 |
| KXG20551 | Sorghum | plasma membrane, plastid | 57.93 | 47.54 |
| TraesCS6A01G310600.1 | Wheat | cytosol | 25.24 | 41.16 |
| TraesCS7A01G436000.1 | Wheat | mitochondrion | 13.92 | 40.76 |
| GSMUA_Achr7P03630_001 | Banana | plasma membrane | 54.05 | 33.0 |
| HORVU2Hr1G099640.3 | Barley | extracellular | 17.48 | 16.8 |
Protein Annotations
| Gene3D:2.10.25.10 | MapMan:22.5.2.1 | Gene3D:3.50.30.30 | EntrezGene:818059 | UniProt:A0A178VYD0 | ProteinID:AAC12834.1 |
| ProteinID:AEC09042.1 | EMBL:AK227629 | ArrayExpress:AT2G34940 | EnsemblPlantsGene:AT2G34940 | RefSeq:AT2G34940 | TAIR:AT2G34940 |
| RefSeq:AT2G34940-TAIR-G | EnsemblPlants:AT2G34940.1 | TAIR:AT2G34940.1 | Unigene:At.37737 | EMBL:BT004565 | InterPro:EGF-like_Ca-bd_dom |
| InterPro:EGF_Ca-bd_CS | GO:GO:0000139 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030665 | GO:GO:0031410 |
| GO:GO:0031902 | RefSeq:NP_181040.1 | UniProt:O64758 | ProteinID:OAP10265.1 | InterPro:PA_domain | PFAM:PF02225 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 |
| PO:PO:0020137 | PO:PO:0025022 | ScanProsite:PS01187 | PANTHER:PTHR22765 | PANTHER:PTHR22765:SF56 | UniProt:Q0WTC8 |
| SMART:SM00179 | SUPFAM:SSF52025 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000000C3B4 | Symbol:VSR5 |
Description
VSR5VSR5 [Source:UniProtKB/TrEMBL;Acc:A0A178VYD0]
Coordinates
chr2:+:14740348..14743417
Molecular Weight (calculated)
69260.6 Da
IEP (calculated)
5.520
GRAVY (calculated)
-0.344
Length
618 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPSNKGTVL ALILALTMVV VNGFSSRFFV EKSSLTVLNS WEMGAKHDAA IANFGLPKYG GFMIGSVVYA GQDAYGCNSF NKTFNTKSPY PKILLIDRGV
101: CNFALKIWNG QQSGAAAVLL ADNIVEPLIT MDTPQDEDPD FIDKVKIPSA LILRSFGDSL KKALKRGEEV ILKMDWSESI PNPDERVEYE LWANTNDECG
201: VHCDKQIDFI KNFKGMAQIL EKGGYTLFRP HYISWVCPKE LLLSKQCRTQ CINQGRYCAL DTKQEFEDGY NGKDVVYENL RQLCVHKVAK EKNTSWVWWD
301: YVTDFNIRCS MKEKKYSREC AETIVESLGL SLEKIKKCIG DPDADVENEV LKAEEAFQLG QENRGIVTIF PTLMINNAQY RGKLERTAVL KAICSGFKER
401: TEPSICLNSD IETNECLIEN GGCWQDKRSN VTACKDTFRG RVCECPVVDG VQYKGDGYTS CKPYGPARCS MNNGDCWSET RKGLTFSSCS DSETSGCRCP
501: LGFLGDGLKC EDIDECKEKS ACKCDGCKCK NNWGGYECKC SNNSIYMKEE DTCIERRSGS RSRGLFTIVV LTAIAGISLG AYIFYKYHLQ SYMDSEIVSI
601: MSQYIPLDSQ SINQDSFK
101: CNFALKIWNG QQSGAAAVLL ADNIVEPLIT MDTPQDEDPD FIDKVKIPSA LILRSFGDSL KKALKRGEEV ILKMDWSESI PNPDERVEYE LWANTNDECG
201: VHCDKQIDFI KNFKGMAQIL EKGGYTLFRP HYISWVCPKE LLLSKQCRTQ CINQGRYCAL DTKQEFEDGY NGKDVVYENL RQLCVHKVAK EKNTSWVWWD
301: YVTDFNIRCS MKEKKYSREC AETIVESLGL SLEKIKKCIG DPDADVENEV LKAEEAFQLG QENRGIVTIF PTLMINNAQY RGKLERTAVL KAICSGFKER
401: TEPSICLNSD IETNECLIEN GGCWQDKRSN VTACKDTFRG RVCECPVVDG VQYKGDGYTS CKPYGPARCS MNNGDCWSET RKGLTFSSCS DSETSGCRCP
501: LGFLGDGLKC EDIDECKEKS ACKCDGCKCK NNWGGYECKC SNNSIYMKEE DTCIERRSGS RSRGLFTIVV LTAIAGISLG AYIFYKYHLQ SYMDSEIVSI
601: MSQYIPLDSQ SINQDSFK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.